Pairwise Alignments

Query, 378 a.a., D-xylose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 331 a.a., D-ribose ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score =  136 bits (342), Expect = 1e-36
 Identities = 117/367 (31%), Positives = 176/367 (47%), Gaps = 65/367 (17%)

Query: 14  LALVIAVAVIWVFFSWQTEGGFLTPRNLSNLLRQMSITGILACGMVLVIISGEIDLSVGS 73
           L L  A+  + V FS+ +   F +    S L  Q+    +LA GM  V+I G IDLSVGS
Sbjct: 27  LGLAGALLAMIVLFSFLSSH-FWSYGTFSTLANQIPDLMVLAVGMTFVLIIGGIDLSVGS 85

Query: 74  LLGLLGGLAAILDVVYHIPLLANLSLVALCGLMIGLANGYMTAYLRIPSFIVGLGGMLAF 133
           +L L     +                VA+ G   G+          +PS ++G+    A 
Sbjct: 86  VLALAASTVS----------------VAILGWGWGV----------LPSALLGM----AV 115

Query: 134 RGILLGITGGTTIAPVSPSLVYVGQGYLPHSVGIGLGVLLFSLTVFLTWKQRRNRALHGL 193
             +   ITGG T+A   PS +            + LGVL  +                GL
Sbjct: 116 AALAGSITGGVTVAWRIPSFI------------VSLGVLEMA---------------RGL 148

Query: 194 AAHSLVRDLVRVAVIGAVLAGFVTTLNSYDGIPVPVLLLLVLLGVFSYVTSQTVFGRRVY 253
           A         R A IG   A F   + ++   P  ++ LLV++ +   V ++TVFGR + 
Sbjct: 149 AYQFTDS---RTAYIGDAYAWFSNPV-AFGVSPAFIIALLVIV-LAQLVLTRTVFGRYLI 203

Query: 254 AVGSNMEATRLSGINVQAVKLWIFGIMGVMCALAGLVNTARLAAGSPSAGNMGELDAIAA 313
            +G+N EA RL+GI+ +  K+ +F +MG++  LA L   +RL A  P+AG+  EL  IAA
Sbjct: 204 GIGTNEEAVRLAGIDPRPYKVLVFALMGLLAGLAALFQISRLEAADPNAGSGLELQVIAA 263

Query: 314 CFIGGTSMRGGSGTVYGALLGALVITSLDNGMSMLDVDSYWQMIVKGSILVLAVWVDV-- 371
             IGGTS+ GG G+V     G L+I+ L  G++ +      + I+ G+++V+AV +D   
Sbjct: 264 VVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGASEPTKRIITGAVIVIAVVLDTYR 323

Query: 372 STRAGRR 378
           S RAGRR
Sbjct: 324 SRRAGRR 330