Pairwise Alignments

Query, 378 a.a., D-xylose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 322 a.a., ribose ABC transporter permease from Dickeya dianthicola ME23

 Score =  187 bits (475), Expect = 3e-52
 Identities = 130/365 (35%), Positives = 189/365 (51%), Gaps = 65/365 (17%)

Query: 7   LFTRYKMLALVIAVAVIWVFFSWQTEGGFLTPRNLSNLLRQMSITGILACGMVLVIISGE 66
           L  +  ++AL+I +AV+           F T  NL N+L+Q S+  I+A GM LVI++  
Sbjct: 17  LMEQKSLIALLILIAVVS-----SMSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG 71

Query: 67  IDLSVGSLLGLLGGLAAILDVVYHIPLLANLSLVALCGLMIGLANGYMTAYLRIPSFIVG 126
           IDLSVGSLL L G +AA +  +    L+A  + +AL G +IG   G + A  R+ +FI  
Sbjct: 72  IDLSVGSLLALTGAVAASIIGLEINALVAVFAALAL-GAVIGAGTGIVIAKGRVQAFIAT 130

Query: 127 LGGMLAFRGILLGITGGTTIAPVSPSLVYVGQGYLPHSVG-IGLGVLLFSLTVFLTWKQR 185
           L  ML  R        G T+   S S +  G      ++G  G+G  L            
Sbjct: 131 LVMMLLLR--------GVTMVYTSGSPINTGFSDAADALGWFGIGRPL------------ 170

Query: 186 RNRALHGLAAHSLVRDLVRVAVIGAVLAGFVTTLNSYDGIPVPVLLLLVLLGVFSYVTSQ 245
                                                 GIP P+ ++ V+     Y+   
Sbjct: 171 --------------------------------------GIPTPIWIMAVVFLATWYMLHH 192

Query: 246 TVFGRRVYAVGSNMEATRLSGINVQAVKLWIFGIMGVMCALAGLVNTARLAAGSPSAGNM 305
           T  GR +YA+G N  ATRLSGI+V  VK+ ++ + G++ ALAG++  ARL++  P+AG  
Sbjct: 193 TRIGRYIYALGGNEAATRLSGISVDRVKVVVYSLCGLLSALAGIIEVARLSSAQPTAGTG 252

Query: 306 GELDAIAACFIGGTSMRGGSGTVYGALLGALVITSLDNGMSMLDVDSYWQMIVKGSILVL 365
            ELDAIAA  +GGTS+ GG G V G L+GAL++  L+NG+++L V SY+QMIVK  +++L
Sbjct: 253 YELDAIAAVVLGGTSLSGGKGRVVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILL 312

Query: 366 AVWVD 370
           AV VD
Sbjct: 313 AVLVD 317