Pairwise Alignments

Query, 447 a.a., cytochrome c component of deoxyribose dehydrogenase (from data) from Pseudomonas simiae WCS417

Subject, 1187 a.a., nicotinate dehydrogenase subunit B (EC 1.17.2.1) (from data) from Pseudomonas putida KT2440

 Score =  247 bits (631), Expect = 1e-69
 Identities = 154/417 (36%), Positives = 213/417 (51%), Gaps = 32/417 (7%)

Query: 6    FARTAGWLALPCLVAAGLLAWYVTREPATPFEQEQAGATFEPALVSRGEYVARLSDCVAC 65
            F   AG       + A  L W     P TP        ++  A++ RG  VA   DC  C
Sbjct: 766  FGSLAGVFGAALGMLATALPWRAEIAPVTP----PGVGSWSAAMLERGRQVAAAGDCAVC 821

Query: 66   HSLAGKAPFAGGLEMATPLGAIHATNITPDKSTGIGTYSLADFDRAVRHGVAPGGRRLYP 125
            H+++G    AGGL M TP G +++TNITPD  TGIG +S A F+RA+R G++  GR LYP
Sbjct: 822  HTVSGGKANAGGLAMDTPFGTLYSTNITPDPETGIGRWSFAAFERAMREGISRDGRHLYP 881

Query: 126  AMPYPSYVKLSDDDIKALYAFFMQGIKPANQPNIPSDIPWPLNMRWPIALWNGVFAPTAT 185
            A PY S+  ++D D++ALYA+ M    P  Q    + + +P N R  +A WN  F     
Sbjct: 882  AFPYTSFRNINDADMQALYAYLMSQ-TPVRQEAPANQMRFPFNQRPLMAGWNARFLQRGE 940

Query: 186  YAAKPDQDALWNRGAYIVQGPGHCGSCHTPRGLAFNEKALDEAGAPFLAGALLDGWYAPS 245
            Y   P + A WNRGAY+V G GHC +CH+PR L   EK     G+ +LAG ++DGW AP+
Sbjct: 941  YQPDPQRSAQWNRGAYLVDGLGHCTACHSPRNLMGAEK----GGSSYLAGGMVDGWEAPA 996

Query: 246  LRQDPNTGLGR----WSEPQIVQFLKTG-RNAHAVVYGSMTEAFNNSTQFMQDDDLAAIA 300
            L       LG+    WSE ++  +L TG    H V  G M    +     +   D+ AIA
Sbjct: 997  L-----NALGKSSTPWSEDELFNYLSTGFSEKHGVAAGPMGPVVSELAT-LPKSDVRAIA 1050

Query: 301  RYLKSLPGDPQRDGAPWQYQAVAAVQDAPGAHTYATRCASCHGLDGKGQPEWMPPLAGAT 360
             YL SL G+PQ   A    Q    V  + G   +   C  CH  DG G     P L G +
Sbjct: 1051 HYLSSLEGEPQALAANAAPQVDTHVSLSNGERVFKGACLGCHS-DGLG-----PKLFGVS 1104

Query: 361  SALAKESASAINITLNGSQRVVASGVP-----DAYRMPAFREQLSDTEIAEVLSYVR 412
             ++A  S    ++  N   RVV  G+P     D   MP F++ LSD ++A++ +Y+R
Sbjct: 1105 PSMAVNSNVHSDLPDN-LLRVVLHGIPTPATRDLGYMPGFKDSLSDRQVADLAAYLR 1160