Pairwise Alignments

Query, 358 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 319 a.a., HTH-type transcriptional regulator CdhR from Pseudomonas putida KT2440

 Score =  259 bits (661), Expect = 9e-74
 Identities = 136/309 (44%), Positives = 196/309 (63%), Gaps = 1/309 (0%)

Query: 6   VSSIVFLLLDQFTLMSLASAVEPLRMANQLSGQELYKWHTASSDGNPVWASDGVPITPEG 65
           + +I FLL+  F+ M   SAVEPLR+AN+  GQ LY+W   S DG  V AS+G+ I  + 
Sbjct: 6   METIAFLLVPGFSAMGFISAVEPLRVANRFGGQ-LYRWQVLSLDGEAVLASNGMSINADA 64

Query: 66  SIFSVPPADIVIVCGGIGIQGTVTGELVKWLRGQARYAKRLGGICTGSFVLARAGLLDGY 125
           ++    PA+I++V  G      V  +L+  LR     A  LGGI TG+ VLA AGLL+GY
Sbjct: 65  ALGEGEPANILLVVAGFEPLANVAPKLLHALRRLNHEAVMLGGIDTGAMVLAEAGLLEGY 124

Query: 126 ECSVHWEWLAAMQEAFPRVTVSSSLFSLDRDRLTSSGGTAPLDMMLHLIGRDHGHELSAA 185
             ++HWE L A +E +P +  +  LF +DR R+T +GGTA +D+MLHLI + HG EL+  
Sbjct: 125 RATLHWEALEAFKERYPGLQATQELFEIDRSRITCAGGTASIDLMLHLIAQSHGSELAVK 184

Query: 186 ISDMFVYERIRNEQDHQRVPLKHMLGTQQPKLQEIVALMEANLEEPINLDELAAYVALSR 245
           +S+ FV  RIR  QDHQR+ +    G    KL   +  ME ++E P++  ELAA + ++R
Sbjct: 185 VSEQFVLGRIRQRQDHQRMQIGARYGISNKKLVHAIGEMEKHIEPPLSTLELAAAIKVTR 244

Query: 246 RQLERMFQKYLHCSPSRYYLRLRLIRARQLLKQTPISIVELAVLCGFVSTPHFSKCYREY 305
           RQLER+F+ +L  +PS +YL LRL +ARQLL QT +S+ E+++ CGF    +F++ Y+  
Sbjct: 245 RQLERLFRMHLDATPSGFYLGLRLDKARQLLAQTDMSVTEVSLACGFELPSYFTRRYKLR 304

Query: 306 FGVPPSDER 314
           FG  P +ER
Sbjct: 305 FGRCPREER 313