Pairwise Alignments

Query, 469 a.a., GABA permease from Pseudomonas simiae WCS417

Subject, 473 a.a., aromatic amino acid transporter from Pseudomonas simiae WCS417

 Score =  263 bits (673), Expect = 7e-75
 Identities = 147/435 (33%), Positives = 240/435 (55%), Gaps = 16/435 (3%)

Query: 6   SNDSNGQLAQGFKPRHVTMLSIAGIIGAGLFVGSGHAIAAAGPAVLLAYLFSGTLVVLVM 65
           S  S+G+L +G K RH+ ++++ G IG GLF+GS   + +AGP+++L Y   G +  ++M
Sbjct: 4   SPSSSGELKRGLKNRHIQLIALGGAIGTGLFLGSAGVLKSAGPSMILGYAICGFIAFMIM 63

Query: 66  RMLGEMAVANPDTGSFSTYADQAIGRWAGFTIGWLYWWFWVLVIPIEALAAGHILNQWFP 125
           R LGEM V  P  GSFS +A +  G +AGF  GW  W  ++LV   E  A G  ++ W+P
Sbjct: 64  RQLGEMIVEEPVAGSFSHFAHKYWGGFAGFLSGWNCWILYILVGMSELTAVGKYVHYWWP 123

Query: 126 QIDAWLFALLSIFLLVVTNLFSVSKYGEFEFWFAMAKVIAIIAFIGLGFAVLMGWI--PE 183
           +I  W+ A     L+ + NL +V  +GE EFWFA+ KV+AI+  I LG  +L+     P+
Sbjct: 124 EIPTWVSAAAFFVLINLINLANVKVFGEAEFWFAIIKVVAIVGMIALGSYLLVSGTGGPQ 183

Query: 184 REVSGLSRLMEEHGGFAPNGLSAVVGAFITIMFSFIGTEAVTIAAAESSNPAQNIARATR 243
             V+ L     EHGGF P+G+  +V A   IMFSF G E +   AAE+  P   I +A  
Sbjct: 184 ASVTNL----WEHGGFFPHGVGGLVMAMAIIMFSFGGLEMLGFTAAEADKPRTVIPKAIN 239

Query: 244 SVMWRIGVFYLLSIFVVISVVPWNDPLLASVGS---------YQRALELMNIPHAKLLVD 294
            V++RI +FY+ ++ V++S+ PW D LLA++ +         + +   ++    A  +++
Sbjct: 240 QVIYRILIFYIGALVVLLSLTPW-DSLLATLNASGDAYSGSPFVQVFSMLGSDTAAHILN 298

Query: 295 VVVLIAVASCMNSSIYIASRMLFSLGKRGDAPALMKKTSAASVPRAAVIASTILGAGVTL 354
            VVL A  S  NS  Y  SRML  + ++GDAP  + K     VP  +++AS  +     L
Sbjct: 299 FVVLTAALSVYNSGTYCNSRMLLGMAEQGDAPKALAKIDKRGVPVRSILASAAITLVAVL 358

Query: 355 FSYFAPAGLFQFLLASSGAIALLVYLVIAVSQLRMRKILRQRNVTLTFQMWLFPWLTWLV 414
            +Y  P    + L++   A  ++ + +I+ S  + R+ + +      F+   +P+  ++ 
Sbjct: 359 MNYLIPQHALELLMSLVVATLVINWAMISFSHFKFRQHMNRTGQVPLFKALWYPYGNYVC 418

Query: 415 IAFICAALTVMLVTP 429
           +AF+   L +ML+ P
Sbjct: 419 LAFVVFILVIMLMIP 433