Pairwise Alignments

Query, 469 a.a., GABA permease from Pseudomonas simiae WCS417

Subject, 463 a.a., gamma-aminobutyrate transporter from Pseudomonas simiae WCS417

 Score =  577 bits (1487), Expect = e-169
 Identities = 292/463 (63%), Positives = 354/463 (76%), Gaps = 3/463 (0%)

Query: 4   LNSNDSNGQLAQGFKPRHVTMLSIAGIIGAGLFVGSGHAIAAAGPAVLLAYLFSGTLVVL 63
           ++S  S+  L QG KPRHVTMLSIAG+IGAGLFVGSGHAIAAAGPAVLLAY  +GTLVVL
Sbjct: 1   MSSTQSSNDLEQGLKPRHVTMLSIAGVIGAGLFVGSGHAIAAAGPAVLLAYAAAGTLVVL 60

Query: 64  VMRMLGEMAVANPDTGSFSTYADQAIGRWAGFTIGWLYWWFWVLVIPIEALAAGHILNQW 123
           VMRML EMAVA+PDTGSFSTYAD+AIG WAGFTIGWLYWWFWVLVIP+EA AA  IL+ W
Sbjct: 61  VMRMLAEMAVASPDTGSFSTYADRAIGHWAGFTIGWLYWWFWVLVIPLEANAAATILHAW 120

Query: 124 FPQIDAWLFALLSIFLLVVTNLFSVSKYGEFEFWFAMAKVIAIIAFIGLGFAVLMGWIPE 183
           FP I  W+F L+   LL  TNLFSV  YGEFEFWFA+ KV+AI+ F+ LG A + G++P 
Sbjct: 121 FPDIAIWVFTLVITLLLTATNLFSVKNYGEFEFWFALIKVVAIVGFVILGLAAIFGFLPT 180

Query: 184 REVSGLSRLMEEHGGFAPNGLSAVVGAFITIMFSFIGTEAVTIAAAESSNPAQNIARATR 243
            +VSG+S L +  G F PNG+ AV+ A +T MFSF+GTE VTIAAAES NP Q I +AT 
Sbjct: 181 SQVSGVSHLFDTQG-FMPNGMGAVLAAILTTMFSFMGTEIVTIAAAESKNPGQQITKATN 239

Query: 244 SVMWRIGVFYLLSIFVVISVVPWNDPLLASVGSYQRALELMNIPHAKLLVDVVVLIAVAS 303
           SV+WRIG+FYLLSIF+V+S+VPWNDP LA+VGSYQ  LE M IP+AKL+VD+VVL+AV S
Sbjct: 240 SVIWRIGLFYLLSIFIVVSLVPWNDPTLAAVGSYQTVLERMGIPNAKLIVDLVVLVAVTS 299

Query: 304 CMNSSIYIASRMLFSLGKRGDAPALMKKTSAASVPRAAVIASTILGAGVTLFSYFAPAGL 363
           C+NS++Y ASRMLFSLG+RGDAPA+ K+T+ +  P  AV+ ST         +Y APA +
Sbjct: 300 CLNSALYTASRMLFSLGRRGDAPAVAKRTNKSGTPYWAVLLSTGAAFLAVFANYVAPAAV 359

Query: 364 FQFLLASSGAIALLVYLVIAVSQLRMRKILRQRNVTLTFQMWLFPWLTWLVIAFICAALT 423
           F+FLLASSGAIALLVYLVIAVSQLRMR+        + F+MWLFP LT+ V+ FI   LT
Sbjct: 360 FEFLLASSGAIALLVYLVIAVSQLRMRQKRTAAGEKIVFKMWLFPGLTYAVMVFIVGTLT 419

Query: 424 VMLVTPEHRFEVSSTIGLALVISLVGLLTARQPERTQKTVGAA 466
           +ML    HR E+ +T  L+L++   GL  + +  R  +  GAA
Sbjct: 420 IMLFQEAHRIEIIATGVLSLLVVAAGLFVSSR--RKTQRAGAA 460