Pairwise Alignments

Query, 469 a.a., GABA permease from Pseudomonas simiae WCS417

Subject, 472 a.a., aromatic amino acid transport protein from Pseudomonas putida KT2440

 Score =  268 bits (685), Expect = 3e-76
 Identities = 160/460 (34%), Positives = 253/460 (55%), Gaps = 16/460 (3%)

Query: 7   NDSNGQLAQGFKPRHVTMLSIAGIIGAGLFVGSGHAIAAAGPAVLLAYLFSGTLVVLVMR 66
           N  +G+L +G K RH+ ++++ G IG GLF+GS   + +AGP+++L Y   G +  ++MR
Sbjct: 5   NMHSGELKRGLKNRHIQLIALGGAIGTGLFLGSAGVMKSAGPSMILGYAICGFIAFMIMR 64

Query: 67  MLGEMAVANPDTGSFSTYADQAIGRWAGFTIGWLYWWFWVLVIPIEALAAGHILNQWFPQ 126
            LGEM V  P  GSFS +A    G +AGF  GW  W  ++LV   E  A G  ++ W+P+
Sbjct: 65  QLGEMIVEEPVAGSFSHFAHTYWGGFAGFLSGWNCWVLYILVGMSELSAVGKYVHYWWPE 124

Query: 127 IDAWLFALLSIFLLVVTNLFSVSKYGEFEFWFAMAKVIAIIAFIGLGFAVLMGWI--PER 184
           I  W+ A     L+   NL +V  +GE EFWFA+ KV+AI++ IGLG  +L      PE 
Sbjct: 125 IPTWVTAAAFFVLINAINLMNVKFFGEAEFWFAIIKVVAIVSMIGLGAYLLTSGSGGPEA 184

Query: 185 EVSGLSRLMEEHGGFAPNGLSAVVGAFITIMFSFIGTEAVTIAAAESSNPAQNIARATRS 244
            V+ L      HGGF PNG+S +V A   IMFSF G E +   AAE+  P   I +A   
Sbjct: 185 TVANL----WTHGGFFPNGVSGLVMALAFIMFSFGGLEMLGFTAAEADKPKTVIPKAINQ 240

Query: 245 VMWRIGVFYLLSIFVVISVVPWNDPLLASV----GSY-----QRALELMNIPHAKLLVDV 295
           V++RI +FY+ ++ V++S+ PW D L+AS+    GSY      +   L+    A  L++ 
Sbjct: 241 VIYRILIFYVGALVVLLSLTPW-DNLVASIDASGGSYGSSPFVQVFSLLGSDVAANLLNF 299

Query: 296 VVLIAVASCMNSSIYIASRMLFSLGKRGDAPALMKKTSAASVPRAAVIASTILGAGVTLF 355
           VVL A  S  NS  Y  +RML  + ++GDAPA + K     VP  +++ S  +     L 
Sbjct: 300 VVLTAALSVYNSGTYCNARMLLGMAEQGDAPASLAKVDKRGVPVRSILVSAAVTFVAVLL 359

Query: 356 SYFAPAGLFQFLLASSGAIALLVYLVIAVSQLRMRKILRQRNVTLTFQMWLFPWLTWLVI 415
           +Y  P    + L++   A  ++ + +I+ S L+ R+ L +      F+   +P+  ++V+
Sbjct: 360 NYLMPQNALELLMSLVVATLVINWAMISYSHLKFRQHLDRTGQKPLFKALWYPYGNYVVL 419

Query: 416 AFICAALTVMLVTPEHRFEVSSTIGLALVISLVGLLTARQ 455
           AF+   L +ML+ P  +  V +     L + +V ++ +R+
Sbjct: 420 AFVVLILGIMLMIPGIQVSVYAIPVWLLAMLVVYMVKSRR 459