Pairwise Alignments

Query, 469 a.a., GABA permease from Pseudomonas simiae WCS417

Subject, 468 a.a., Amino-acid permease RocE from Pseudomonas putida KT2440

 Score =  262 bits (670), Expect = 2e-74
 Identities = 155/425 (36%), Positives = 248/425 (58%), Gaps = 9/425 (2%)

Query: 12  QLAQGFKPRHVTMLSIAGIIGAGLFVGSGHAIAAAGPA-VLLAYLFSGTLVVLVMRMLGE 70
           QL +  K RH+ MLS+ G+IG GLF+GSG  I   GP   +LAYL +G L+ LVM  LGE
Sbjct: 9   QLTRALKSRHIFMLSLGGVIGTGLFMGSGVTINQGGPVGAILAYLVAGLLMYLVMVCLGE 68

Query: 71  MAVANPDTGSFSTYADQAIGRWAGFTIGWLYWWFWVLVIPIEALAAGHILNQWFPQIDAW 130
           ++V  P +GSF  +A + IG   GF IGW+YW  W   + +E  AAG ++ +WFP++  W
Sbjct: 69  LSVQMPVSGSFQAHATKYIGPATGFMIGWVYWMSWATTVGLEFTAAGMLMTRWFPEVPIW 128

Query: 131 LFALLSIFLLVVTNLFSVSKYGEFEFWFAMAKVIAIIAFIGLGFAVLMGWIPEREVSGLS 190
            ++ L + +L   N  +   +GE E+WF+  KV  I+ FI +G  V+ G IP    +   
Sbjct: 129 YWSALFVVVLFGLNALATRAFGEAEYWFSGIKVATILGFIVIGLLVIFGAIPLSSGAPAP 188

Query: 191 RLMEEHG-GFAPNGLSAVVGAFITIMFSFIGTEAVTIAAAESSNPAQNIARATRSVMWRI 249
            L    G    P+GLSAV    +T++++F G E + +AA E+ +P ++I RA R+V++R+
Sbjct: 189 MLNNLVGESLFPHGLSAVFAVMMTVVYAFQGCEIMGVAAGETEHPEKSIPRAVRNVVFRV 248

Query: 250 GVFYLLSIFVVISVVPWNDPLLASVGSYQRALELMNIPHAKLLVDVVVLIAVASCMNSSI 309
            +FY+L+I V+ ++VP     L     + +  +++ IP+A  L++ V+L A+ S  NS +
Sbjct: 249 LIFYVLAIAVLSAIVPHEQAGLME-SPFVQVFDMVGIPYAADLMNFVILTAILSVGNSGL 307

Query: 310 YIASRMLFSLGKRGDAPALMKKTSAASVPRAAVIASTILGAGVTLFSYFAPAG-LFQFLL 368
           Y ++R+L+++ K G AP  +   S   VP  A ++ T+  A ++L + F  A  LF  L+
Sbjct: 308 YASTRILWAMSKTGMAPKSLSPLSKRGVPLRA-LSITLCFALISLMTSFVAADTLFMVLM 366

Query: 369 ASSGAIALLVYLVIAVSQLRMRKI-LRQ--RNVTLTFQMWLFPWLTWLVIAFICAALTVM 425
           A SG    + ++VIA++Q R RK  LR   +   L ++  L+P +  L I  +C++L V 
Sbjct: 367 AVSGMSGTVTWIVIALAQYRFRKAWLRDGGQLQDLKYKAPLYPLVPLLCIT-LCSSLFVF 425

Query: 426 LVTPE 430
           L   E
Sbjct: 426 LALDE 430