Pairwise Alignments

Query, 469 a.a., GABA permease from Pseudomonas simiae WCS417

Subject, 470 a.a., gamma-aminobutyrate permease from Pseudomonas putida KT2440

 Score =  446 bits (1147), Expect = e-130
 Identities = 231/446 (51%), Positives = 313/446 (70%), Gaps = 8/446 (1%)

Query: 12  QLAQGFKPRHVTMLSIAGIIGAGLFVGSGHAIAAAGPAVLLAYLFSGTLVVLVMRMLGEM 71
           +L+   K RH+TM+SIAG+IG  LFVGSG  I +AGPA +LAYL  G LVVL+MRMLGEM
Sbjct: 17  KLSASLKSRHLTMMSIAGVIGGALFVGSGSVIHSAGPAAVLAYLAGGILVVLIMRMLGEM 76

Query: 72  AVANPDTGSFSTYADQAIGRWAGFTIGWLYWWFWVLVIPIEALAAGHILNQWFPQIDAWL 131
           A ++PDTGSFSTYAD+AIGRWAGFTIGWLYWW+WV+++  EA  AG IL+ +FP +   +
Sbjct: 77  ATSSPDTGSFSTYADRAIGRWAGFTIGWLYWWYWVILMAWEAYVAGKILHGFFPDVSVNV 136

Query: 132 FALLSIFLLVVTNLFSVSKYGEFEFWFAMAKVIAIIAFIGLGFAVLMGWIPEREVSGLSR 191
           F L +  LL+  N F+V  YGEFEFWFA+ KVIAI+ F+ +  A +M      EV G+S 
Sbjct: 137 FVLATTLLLITVNFFNVKHYGEFEFWFALIKVIAIVCFLIVCTAAVMNIWQFGEVRGISH 196

Query: 192 LMEEHGGFAPNGLSAVVGAFITIMFSFIGTEAVTIAAAESSNPAQNIARATRSVMWRIGV 251
           L  E  GF PNG++ V+GA + +MF+F+G E VTIAA+E+ +PA  I +AT SV+WR+ +
Sbjct: 197 LTAE--GFMPNGITTVIGALLGVMFAFLGAEIVTIAASEAKDPAAQIVKATNSVVWRVCL 254

Query: 252 FYLLSIFVVISVVPWNDPLL--ASVGSYQRALELMNIPHAKLLVDVVVLIAVASCMNSSI 309
           FY+ SIF+++ +VPWNDP L  +  G+Y+R LEL+ +P+A+LL++ VVL +V+SC+ S  
Sbjct: 255 FYVGSIFLIVCLVPWNDPHLGVSGYGAYRRTLELLGVPYAELLMNFVVLTSVSSCLISGH 314

Query: 310 YIASRMLFSLGKRGDAPALMKKTSAAS-VPRAAVIASTILGAGVTLFSY---FAPAGLFQ 365
           Y ASRMLFSL +RGDAP+  K T A + VP  A++ S  +     L ++     P  +  
Sbjct: 315 YTASRMLFSLAQRGDAPSFFKITRAGTGVPVYAIMGSCAVAVVCALINFSETLRPKDVLD 374

Query: 366 FLLASSGAIALLVYLVIAVSQLRMRKILRQRNVTLTFQMWLFPWLTWLVIAFICAALTVM 425
            L+ ++G IALLVYLVIA SQLRMR+ L      +  +MWLFPWLT+LVIAFI AAL  M
Sbjct: 375 TLMNTTGMIALLVYLVIAFSQLRMRRKLIAEGKEVRLKMWLFPWLTYLVIAFIVAALVTM 434

Query: 426 LVTPEHRFEVSSTIGLALVISLVGLL 451
              P+++  V ST   A V+  +G++
Sbjct: 435 AFMPDYQILVISTGIAAAVVVAMGVV 460