Pairwise Alignments

Query, 469 a.a., GABA permease from Pseudomonas simiae WCS417

Subject, 472 a.a., Uncharacterized amino acid permease YtnA from Pseudomonas putida KT2440

 Score =  286 bits (733), Expect = 8e-82
 Identities = 159/447 (35%), Positives = 259/447 (57%), Gaps = 16/447 (3%)

Query: 11  GQLAQGFKPRHVTMLSIAGIIGAGLFVGSGHAIAAAGPAVLLAYLFSGTLVVLVMRMLGE 70
           G L +    RH+ ++++   IG GLF+GS  AI  AGPA++L+Y+  G  ++++MR LGE
Sbjct: 16  GPLKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGPAIMLSYIIGGLAILVIMRALGE 75

Query: 71  MAVANPDTGSFSTYADQAIGRWAGFTIGWLYWWFWVLVIPIEALAAGHILNQWFPQIDAW 130
           MAV NP  GSFS YA   +G  AGF  GW YW+ W++    E  A    +  WFP +  W
Sbjct: 76  MAVHNPVAGSFSRYAQDYLGPLAGFLTGWNYWFLWLVTCVAEITAVAIYMGIWFPDVPRW 135

Query: 131 LFALLSIFLLVVTNLFSVSKYGEFEFWFAMAKVIAIIAFI--GLGFAVLMGWIPEREVSG 188
           ++AL ++  +   NL +V  +GEFEFWFA+ K++ IIA +  G+G  +  G+  +    G
Sbjct: 136 IWALAALGSMGAVNLVAVKAFGEFEFWFALIKIVTIIAMVLGGIGI-IAFGFGNDGVAVG 194

Query: 189 LSRLMEEHGGFAPNGLSAVVGAFITIMFSFIGTEAVTIAAAESSNPAQNIARATRSVMWR 248
           +S L   +GGF PNG++ V+ +   +MF+++G E + + A E+ NP + I +A  SV WR
Sbjct: 195 ISNLW-SNGGFMPNGVTGVLMSLQMVMFAYLGVEMIGLTAGEARNPQKTIPQAIGSVFWR 253

Query: 249 IGVFYLLSIFVVISVVPWNDPLLASVGS-YQRALELMNIPHAKLLVDVVVLIAVASCMNS 307
           I +FY+ ++FV++S+ PWN+  + S GS +    E + I  A  +++ VV+ A  S  N 
Sbjct: 254 ILLFYVGALFVILSIYPWNE--IGSQGSPFVMTFERLGIKTAAGIINFVVITAALSSCNG 311

Query: 308 SIYIASRMLFSLGKRGDAPALMKKTSAASVPRAAV---IASTILGAGVTLFSYFAPAGLF 364
            I+   RML+SL + G APA   +TS   VPR A+   I + +LG    L +Y  P  +F
Sbjct: 312 GIFSTGRMLYSLAQNGQAPAAFARTSKNGVPRNALLLSIGALLLG---VLANYLVPEKVF 368

Query: 365 QFLLASSGAIALLVYLVIAVSQLRMRK-ILRQRNVTLTFQMWLFPWLTWLVIAFICAALT 423
            ++ + +   A+  +++I ++QL+ R  +       L ++MWL+P  ++L +AF+   + 
Sbjct: 369 VWVTSIATFGAIWTWVMILLAQLKFRAGLTTAERKALKYRMWLWPLSSYLALAFLVLVVG 428

Query: 424 VMLVTPEHRFEVSSTIGLALVISLVGL 450
           +M    + R  V+  IG A ++ L  L
Sbjct: 429 LMAYFEDTR--VALYIGPAFLVLLTVL 453