Pairwise Alignments

Query, 469 a.a., GABA permease from Pseudomonas simiae WCS417

Subject, 453 a.a., aromatic amino acid transport protein from Pseudomonas putida KT2440

 Score =  280 bits (716), Expect = 7e-80
 Identities = 159/427 (37%), Positives = 236/427 (55%), Gaps = 9/427 (2%)

Query: 12  QLAQGFKPRHVTMLSIAGIIGAGLFVGSGHAIAAAGPAVLLAYLFSGTLVVLVMRMLGEM 71
           +L +G K RH+ ++++ G IG GLF+G    I  AGP+VLL Y  +G +  L+MR LGEM
Sbjct: 9   RLQRGLKNRHIQLIALGGAIGTGLFLGIAQTIQLAGPSVLLGYAIAGLMAFLIMRQLGEM 68

Query: 72  AVANPDTGSFSTYADQAIGRWAGFTIGWLYWWFWVLVIPIEALAAGHILNQWFPQIDAWL 131
            V  P  GSFS +A Q    +AGF  GW YW  +VLV   E  A G  +  W+P    W 
Sbjct: 69  VVEEPVAGSFSHFAHQYWSEFAGFVSGWNYWVVYVLVGMAELTAVGIYVQYWWPDFPTWA 128

Query: 132 FALLSIFLLVVTNLFSVSKYGEFEFWFAMAKVIAIIAFIGLGFAVLMG---WIPEREVSG 188
            A +   ++ + NL  V  YGE EFWFA+ KV+AI++ IG G A L+G     P+  V+ 
Sbjct: 129 TAAIFFVVINLINLTQVKVYGEMEFWFALVKVVAIVSMIGFG-AWLLGSGHGGPDASVAN 187

Query: 189 LSRLMEEHGGFAPNGLSAVVGAFITIMFSFIGTEAVTIAAAESSNPAQNIARATRSVMWR 248
           L     ++GGF PNG++ +V A   IMFSF G E V I AAE+ NP ++I +AT  V++R
Sbjct: 188 L----WQYGGFFPNGVTGLVMALAVIMFSFGGLELVGITAAEADNPRESIPKATNQVVYR 243

Query: 249 IGVFYLLSIFVVISVVPWNDPLLASVGSYQRALELMNIPHAKLLVDVVVLIAVASCMNSS 308
           I +FY+ ++ V++S+ PW   ++     +      ++      ++++VVL A  S  NS 
Sbjct: 244 ILIFYIGALAVLLSLYPW-QKVVQGGSPFVMIFHELDSDLVATILNIVVLTAALSVYNSC 302

Query: 309 IYIASRMLFSLGKRGDAPALMKKTSAASVPRAAVIASTILGAGVTLFSYFAPAGLFQFLL 368
           +Y  SRMLF L  +GDAP  + K S + VP  A+  S        L +Y  P G F  L+
Sbjct: 303 VYANSRMLFGLASQGDAPRQLLKVSRSGVPLTALAVSAFATGLCVLINYLMPGGAFGLLM 362

Query: 369 ASSGAIALLVYLVIAVSQLRMRKILRQRNVTLTFQMWLFPWLTWLVIAFICAALTVMLVT 428
           A + +  ++ +  I+++ L+ RK      +T  ++    P   +L +AFI   L VM +T
Sbjct: 363 ALAVSALVINWASISITHLKFRKAKLAAGITPFYKSLGHPLTNYLCLAFIVLILVVMYLT 422

Query: 429 PEHRFEV 435
           P  R  V
Sbjct: 423 PPIRISV 429