Pairwise Alignments

Query, 469 a.a., GABA permease from Pseudomonas simiae WCS417

Subject, 490 a.a., amino acid permease from Dickeya dianthicola ME23

 Score =  265 bits (676), Expect = 3e-75
 Identities = 149/423 (35%), Positives = 236/423 (55%), Gaps = 13/423 (3%)

Query: 13  LAQGFKPRHVTMLSIAGIIGAGLFVGSGHAIAAAGPA-VLLAYLFSGTLVVLVMRMLGEM 71
           L +  K RH+TM++I G IG GLFV SG  ++ AGP   +L+Y   G +V  +M  LGE+
Sbjct: 16  LRRELKARHLTMIAIGGSIGTGLFVASGATVSQAGPGGAMLSYALIGLMVYFLMTSLGEL 75

Query: 72  AVANPDTGSFSTYADQAIGRWAGFTIGWLYWWFWVLVIPIEALAAGHILNQWFPQIDAWL 131
           A   P +GSFSTY  + +    GF +GW YW+ W + I ++ +AA  ++  WFP    W+
Sbjct: 76  AAFMPVSGSFSTYGARYVEEGFGFALGWNYWYNWAVTIAVDLVAAQLVMGYWFPSAPGWV 135

Query: 132 FALLSIFLLVVTNLFSVSKYGEFEFWFAMAKVIAIIAFIGLGFAVLMGWIPEREVSGLSR 191
           ++ L + L+ + N  SV  +GE E+WF++ KV  +I FI +G  ++ G +   E +G   
Sbjct: 136 WSALFLSLMFLLNYISVKGFGEAEYWFSLIKVTTVILFIAIGLLMMFGILRGGEHAGWHN 195

Query: 192 LMEEHGGFAPNGLSAVVGAFITIMFSFIGTEAVTIAAAESSNPAQNIARATRSVMWRIGV 251
                  FA  G SA++G  + + FSF GTE + +AA ES +P   I RA R V WRI +
Sbjct: 196 WQIGDAPFA-GGFSAMIGVAMIVGFSFQGTELIGVAAGESKDPQTTIPRAVRQVFWRILL 254

Query: 252 FYLLSIFVVISVVPWNDPLL-------ASVGSYQRALELMNIPHAKLLVDVVVLIAVASC 304
           FY+ +I ++  +VP+ DP L        SV  +    E   +  A  +++ V+L AV S 
Sbjct: 255 FYIFAILIISLLVPYTDPNLLRNDVKDISVSPFTLVFENAGLLSAAAVMNAVILTAVLSA 314

Query: 305 MNSSIYIASRMLFSLGKRGDAPALMKKTSAASVPRAAVIASTILGAGVTLFSYFAPAGLF 364
            NS +Y ++RMLF+L + G APA   K S   VPR A+  +T++     L S F    ++
Sbjct: 315 GNSGMYASTRMLFTLAQEGKAPACFGKLSKGGVPRNALYVTTVVAGLCFLSSMFGNQTVY 374

Query: 365 QFLLASSGAIALLVYLVIAVSQLRMRK--ILRQRNV-TLTFQMWLFPWLTWLVIAFICAA 421
            +LL +SG    + +L IA+S  R R+  +++ R++ +L ++   FP L  +    +C  
Sbjct: 375 LWLLNTSGMTGFIAWLGIAISHYRFRRGYVMQGRDLSSLPYRSGFFP-LGPIFAFVLCLV 433

Query: 422 LTV 424
           +T+
Sbjct: 434 ITL 436