Pairwise Alignments

Query, 397 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

Subject, 376 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

 Score = 70.9 bits (172), Expect = 6e-17
 Identities = 86/375 (22%), Positives = 161/375 (42%), Gaps = 26/375 (6%)

Query: 9   VITSDEQALIVA-SDLAE-DLRRDSAQRDRERRLPLPELEVFSRSGLWGISVPKAFGGAG 66
           ++ +D++A+  A  D ++ +L  ++ + DRE   P    +  +  G +GI VP+  GGAG
Sbjct: 2   LLNADQEAIRDAVRDFSQAELWPNAPKWDREHSFPKEAHQGLAALGAYGICVPEEHGGAG 61

Query: 67  VSNVTLAKVIALIAQADASLGQIPQNHFYALEVLRVNGSPAQQKRLYAEVLAGQRFGNAL 126
           +  +TLA V+  IA  D             +  + +    AQQK+ + E LA  +   A 
Sbjct: 62  LDYLTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQKKQWLEPLAQGKMLGAF 121

Query: 127 AELGTKTAHDRV---TKITRDGDGFRISGRKFYATGAIYAQRIPTSVVDEQGV----QQL 179
                +   D     T   +DGD + I G K + T     Q      V ++G        
Sbjct: 122 CLTEPQAGSDASSLRTTARKDGDAYVIDGVKQFITSGKNGQVAIVIAVTDKGAGKRGMSA 181

Query: 180 AFVPRDSEGLSVIDDWSGFGQRTTGSGSVVFDNVWVAAQDVIPFQSAFERPTTVGPL--A 237
             VP D+ G +V       GQ ++ +  + FD   +  +++I  +    +   +G L   
Sbjct: 182 FLVPTDAPGYNVARLEDKLGQHSSDTAQINFDGCRIPVENLIGAEGEGYK-IALGALEGG 240

Query: 238 QILHAAIDTGIARAAFEDALHFVRTKTRPWIDSGTDKATDDPLTLKSFGHLSIRLHATEA 297
           +I  AA   G+AR+AF+ AL + + + + +  S  D+             +  RL     
Sbjct: 241 RIGIAAQSVGMARSAFDVALAYAKER-QAFGGSIFDQQA-----------VGFRLAECAT 288

Query: 298 LLERSGEFLDRAQADSNAETVAAASIAVAEVRALSTEISLAAGSTLFELAGSQATLAEHG 357
            LE + + +  A A  +A        A+A++   ++E++    S   +  G    + +  
Sbjct: 289 QLEAARQLIWHAAALRDAGRPCLKEAAMAKL--FASEMAERVCSAAIQTLGGYGYVNDFP 346

Query: 358 LDRHWRNARVHTLHD 372
           L+R +R+ RV  +++
Sbjct: 347 LERIYRDVRVCQIYE 361