Pairwise Alignments

Query, 353 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 459 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  102 bits (254), Expect = 2e-26
 Identities = 86/268 (32%), Positives = 124/268 (46%), Gaps = 10/268 (3%)

Query: 81  RRILMPLNSVAENLRKLADGDLDVQAVAGDESIGEAAILVNDFNSMAQRLKRMAQEQAFW 140
           RR L PL ++A    + +   L  Q +A D+   E        N +  R++ M   +  +
Sbjct: 186 RRTLNPLEAIAARWNERSHASL--QPIAADDMPRELMPFATALNDLLARIRAMLTREQQF 243

Query: 141 NAAIAHELRTPLTILRGRLQGLAEGVFEPDTAQFYSLLGQ-VEGLARMIEDLRVVGLGDS 199
            A +AH+LRTPL  L+  +   AE      + Q    LG  V+  ARM++ L  +G  D 
Sbjct: 244 AATVAHQLRTPLAGLQLGVTRAAEAGDLESSRQVLGELGNTVQRTARMVQQLLALGRLDP 303

Query: 200 GYL-EVNVQDADLAAGVEDDVRLFEPSLAAAGFTLQLDLQRRTL--RCDPARIRQALLAL 256
                ++    DLAA   D    F    A+   TL+LD     +  R  P    +AL  L
Sbjct: 304 EVRGNLSFVPTDLAALAHDVGSTFLEFAASRSITLELDAPAEPVMVRLQPELFSEALGNL 363

Query: 257 LDNVRRHATPGNVNVHLSTRDGVHYLRVRDDGPGIDEDFATHLFEAFQRGENSRSRAQGG 316
           LDN  R+   G   V +        +RV D+GPG+ ++    +FE F RG++    A  G
Sbjct: 364 LDNALRYTQEGGA-VLIGFDTSPPSIRVSDNGPGVPKELYEAVFERFVRGQHV---AGEG 419

Query: 317 SGLGLAVVRAIAIAHGGAVTCRKMENGG 344
           SGLGLA+VR IA  HG  VT  +   GG
Sbjct: 420 SGLGLAIVRDIAALHGATVTLSQGALGG 447