Pairwise Alignments

Query, 353 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 535 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

 Score =  116 bits (290), Expect = 2e-30
 Identities = 95/302 (31%), Positives = 146/302 (48%), Gaps = 21/302 (6%)

Query: 59  AWMGLTTCVSLAVGAFVATKLSRRILMPLNSVAENLRKLADGDLDVQAVAGD-ESIGEAA 117
           A++GL  C+   V   +  +L RR+    + +     ++A G LD +  AGD +S+G  A
Sbjct: 239 AFLGL--CLIGLVVYLLVRQLERRV----SGLEIAATRIAQGSLDTRVPAGDADSVGRLA 292

Query: 118 ILVNDFNSMAQRLKRMAQEQAFWNAAIAHELRTPLTILRGRLQGLAEGVFEPDTAQFYSL 177
                FN MA+ L+R    Q     A++HELRTP+  LR  L+ +     E   A+  + 
Sbjct: 293 AA---FNGMAEHLQRSLTMQRELVRAVSHELRTPVARLRFGLEMIESATTEQVRAKHLAG 349

Query: 178 L-GQVEGLARMIEDLRVVGLGDSGYLEVNVQDADLAAGVEDDVRLFEPSLAAA----GFT 232
           + G ++ L ++++++      + G   +  Q  DL A ++  +    P  A      G  
Sbjct: 350 MDGDIQDLDKLVDEMLTYARLEQGAPALKFQRVDLDALLDRVIEELAPLRAEVRVVRGDC 409

Query: 233 LQLDLQRRTLRCDPARIRQALLALLDNVRRHATPGNVNVHLSTRDGVHYLR--VRDDGPG 290
              D +   +  +P  + +AL  L+ N  RHA      V LS + G    R  V DDGPG
Sbjct: 410 QGADAEGAWVEAEPRYLHRALQNLVGNAMRHAEG---EVRLSYQLGQQRCRIDVEDDGPG 466

Query: 291 IDEDFATHLFEAFQRGENSRSRAQGGSGLGLAVVRAIAIAHGGAVTCRKMEN-GGTLFEL 349
           I E F   +F  F R ++SR+RA GG GLGL++VR I   H G  T  + E  GG  F L
Sbjct: 467 IPEGFWDRIFTPFTRLDDSRTRASGGHGLGLSIVRRIIYWHAGRATVGRSEALGGACFSL 526

Query: 350 SW 351
           +W
Sbjct: 527 NW 528