Pairwise Alignments

Query, 299 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 307 a.a., putative choline betaine-binding protein from Pseudomonas putida KT2440

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 81/291 (27%), Positives = 137/291 (47%), Gaps = 15/291 (5%)

Query: 7   YRKKACAYLLGLALGASAAVTQAEEKPPVRIGWVNWSDTEITVKLASTALQEHLKQSVKL 66
           ++  A  + L L+   + A     +   V++    WSD   T  +A   L E L   VK+
Sbjct: 2   HKFSAAVFALALSATTAHAADSDAQCSTVKMADPGWSDIASTNAVARLLL-ESLGYQVKI 60

Query: 67  VMADIGIQFQALANGNIDLIPMVWLPSTHKAFYDKY--KDRLEDLGVLYEG-RIGMAVPT 123
               + I +  L +G +D     W+P+  + F+DK+     ++ L    EG    +AVP 
Sbjct: 61  DSLAVPIIYGGLKDGQVDAFLGNWMPA-QQGFHDKFIANGDVQQLSRNLEGTEFTLAVPD 119

Query: 124 SVPVAEVASVEDLNKPGIREKFDGKILTSEVGNGQ-YTLTVKAIED---YKLTGYKLVGS 179
            V  A V    DL K     +FD K+    +G+G    L++KAI D   + L  +KLV S
Sbjct: 120 YVWNAGVKDFADLQKHA--GQFDKKLYG--IGSGAPANLSLKAIIDKNEFNLGQWKLVES 175

Query: 180 SESGMLNEMDRNLKRDKWSLVNAWSPHWMFSKWSLRYLEDPKQIFGGAEQIHAMARKGFS 239
           SE  ML ++DR +K+ ++     W+PH M  K  + YL   ++ FG   +++ + RKG+ 
Sbjct: 176 SEQAMLAQVDRAVKKQQFITFLGWTPHPMNVKLKMHYLTGGEKWFGSKGEVYTLTRKGYP 235

Query: 240 QEHPEVAYFFAH--FSLPQADLEALMMQARESTADKAVAAYYAANKARFEG 288
           Q  P  A    +  F+L   +     +  ++ + D+A  A+  A+  R +G
Sbjct: 236 QACPNAAKLLGNLKFTLDMENSIMAEVVDKKISFDEAAKAWVKAHPERLDG 286