Pairwise Alignments

Query, 741 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 688 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  413 bits (1062), Expect = e-119
 Identities = 275/711 (38%), Positives = 392/711 (55%), Gaps = 52/711 (7%)

Query: 49  RQAVLDLSSMRVEHTALRQ--------SEERFRTILETVESAFAIVKVKFDADDRPI-DY 99
           RQ V DL     ++T L Q         ++ +R++ +T++  F I++  FD    P+ DY
Sbjct: 10  RQQVEDLQR---QNTLLEQRLASLQAHDQDFYRSLFDTMDEGFCIIEF-FDGPHGPLSDY 65

Query: 100 RFVEANPAFEHQAGV-DLRGKWVTEFAPDLEQFWFETYGHVAKTGEPATFESYAEAFKRW 158
             V AN A+   AG+ ++ G+ + E  PD    W   YG V +TGEP  FE    A    
Sbjct: 66  VHVLANAAYAKHAGIPNVVGQKLREMVPDEADDWVARYGAVLRTGEPLHFEQELIATGHV 125

Query: 159 FDVRAVRVGDPADRQIAIIFSDVTERRNAEERL-RISEAVARQNVERVQLALAAGAIIGT 217
             V   R+     RQ+A++F DVTERR AE+ L R++E +     +RV  ALA   +   
Sbjct: 126 LSVTTFRIEPAEKRQVAVLFKDVTERRRAEQALQRLNEELE----QRVNAALAERRLFAE 181

Query: 218 WHWDIPSDRFSIDEAFARAFGVDP-----ALGHEGLSLAQVMTSVHPEDREGLTTAIHAA 272
                      +D +      VD      A+  +      ++    PE  + L       
Sbjct: 182 ----------LVDHSVVNVHVVDKDLRWLAVNRQARHDFHLLYGRTPEIGDYLPGLFEDG 231

Query: 273 IARGGAYAHQYRVRRDDGRYYWIEANGRVDLAEDGTPLTLPGVVIDVESRRSVEAERDRA 332
            A        ++ R   G  +       +++   G P  +    +   + R  + E   A
Sbjct: 232 TAGQTPILPMWQ-RALAGEQF-------IEIGTFGKPPAVRHYELRFNALRDPKGEVQGA 283

Query: 333 TAALRALNETLEQRVAERTVELIQAEEKLRQSQKMEAVGQLTGGLAHDFNNLLAGISGAL 392
                 ++E ++++  ER   L +AE  LRQ+QKMEAVGQL+GG+AHDFNNLL GI GA 
Sbjct: 284 FLFAYDISERVQEQ--ER---LAKAEAALRQAQKMEAVGQLSGGIAHDFNNLLGGILGAQ 338

Query: 393 ELTGLRIAQGRWQEVDKYISTAQGAAKRAAALTHRLLAFSRRQTLDPRPTDVNVLMEGMG 452
           EL   R+ Q R+  +   +  +  AA+RA++L HRLLAFSR+QTL P  T V  L+ GM 
Sbjct: 339 ELMRQRLDQSRFDALAPLLELSSSAAQRASSLVHRLLAFSRQQTLQPCSTQVATLVAGME 398

Query: 453 ELIQRTVGPSITVDTLGASGVWPTLVDASQLENALLNLCINARDAMPHGGRIRIETANVC 512
           +L++RT+GP+IT+ +  AS +WPT +D  QLE+ALLNLCINARDAMP GG I I   N+ 
Sbjct: 399 DLLRRTIGPAITLSSRFASQLWPTFIDPPQLESALLNLCINARDAMPAGGVIEIIGDNLL 458

Query: 513 VDAATASAHDLTEGEYLTLTVSDTGTGMTPEIMAKAFDPFFTTKPIGQGTGLGLSMIYGF 572
           +D   A A +L   E++ L++ D G+GM+ E++ +A +PFFTTKP+GQGTGLGLSM YGF
Sbjct: 459 LDDEQAVALELPASEFVRLSIVDNGSGMSAEVVERAVEPFFTTKPMGQGTGLGLSMTYGF 518

Query: 573 AKQSGGQARIASQVGRGTAISLYLPRYQGQA---IEADPELDSTSATPAERGETILIVDD 629
            +QSGGQ R+ S  G GT I L LPR+  QA   I   P   +     +E  + IL+V+D
Sbjct: 519 VRQSGGQLRVLSVPGEGTRIELLLPRHHEQAQAPISKPPR--TLLQRSSEAAKRILLVED 576

Query: 630 EPSVRTLLMDVLGGLDYSLIEASDSITGLKILRSDVHIDLLITDVGLPGGMNGRQMADAG 689
           + ++R ++ +VL  L Y +    +  + L  L+S    DLL++DVGLPGG+NGRQ+A+  
Sbjct: 577 QTALRLVIGEVLEELGYRVDAFENGPSALTHLQSGERPDLLLSDVGLPGGLNGRQVAERF 636

Query: 690 REVRPALKTLFITGYAESTIIGDNSLGPGMQVLTKPFAIDTLTARVRELIE 740
           RE  P LK L ITGY ES    D     G  VLTKPF ++ L  RVREL+E
Sbjct: 637 RERYPDLKVLLITGYDESAAFSDGQPLQGTLVLTKPFELEALAERVRELLE 687