Pairwise Alignments

Query, 741 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 553 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  340 bits (871), Expect = 1e-97
 Identities = 193/402 (48%), Positives = 256/402 (63%), Gaps = 4/402 (0%)

Query: 343 LEQRVAERTVELIQAEEKLRQSQKMEAVGQLTGGLAHDFNNLLAGISGALELTGLRIAQG 402
           + QRV E+   L QAEE LRQ+QKMEAVGQLTGG+AHDFNNLLA I GALEL G R+ Q 
Sbjct: 148 ITQRVTEQE-RLQQAEEALRQAQKMEAVGQLTGGIAHDFNNLLASILGALELAGQRLVQQ 206

Query: 403 RWQEVDKYISTAQGAAKRAAALTHRLLAFSRRQTLDPRPTDVNVLMEGMGELIQRTVGPS 462
           R  +  + +  ++  A+RAAAL  RLLAFSR+QTL P+  DV  L+ GM +LI  + GP 
Sbjct: 207 RLADTTQLLELSRHNAQRAAALVQRLLAFSRQQTLVPQRVDVQQLVAGMHDLISSSTGPY 266

Query: 463 ITVDTLGASGVWPTLVDASQLENALLNLCINARDAMPHGGRIRIETANVCVDAATASAHD 522
           +       +G+WP  +DA QLENALLNLCINARDAMP GG + I  ANV V  A A    
Sbjct: 267 VDYHDQTHAGLWPIRIDAQQLENALLNLCINARDAMPLGGTLSIGCANVEVQGAEARQLG 326

Query: 523 LTEGEYLTLTVSDTGTGMTPEIMAKAFDPFFTTKPIGQGTGLGLSMIYGFAKQSGGQARI 582
           L  G +L + V DTG GM+  +M +A +PFFTTKP+GQGTGLGLSM+YGF +QSGGQ  I
Sbjct: 327 LAAGRFLRIRVEDTGMGMSKAVMQRALEPFFTTKPLGQGTGLGLSMVYGFVRQSGGQLVI 386

Query: 583 ASQVGRGTAISLYLPRYQG-QAIEADPELD--STSATPAERGETILIVDDEPSVRTLLMD 639
            S +G+GTAI+LYLP  +   A    P ++  + +A+  +R   +++V+DEP++R ++++
Sbjct: 387 DSTLGQGTAINLYLPCDESIAAASPSPHVEGPAPAASLQQRVCKVMLVEDEPALRLVMLE 446

Query: 640 VLGGLDYSLIEASDSITGLKILRSDVHIDLLITDVGLPGGMNGRQMADAGREVRPALKTL 699
           VL    + +    D     K L+     DLLITDVGLPGG++G Q+ADA R + P    L
Sbjct: 447 VLLDQGHEVQAFEDGRQAYKALQEAPAPDLLITDVGLPGGIDGYQLADACRGIAPHAAVL 506

Query: 700 FITGYAESTIIGDNSLGPGMQVLTKPFAIDTLTARVRELIES 741
            ITGY  +            ++L KPF +  L   +  L+ S
Sbjct: 507 LITGYDLAHSTAKARPHRRTELLAKPFDLQALAQALERLLGS 548