Pairwise Alignments

Query, 486 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 471 a.a., integrase from Rhodanobacter sp000427505 FW510-R12

 Score = 70.5 bits (171), Expect = 1e-16
 Identities = 87/350 (24%), Positives = 145/350 (41%), Gaps = 45/350 (12%)

Query: 164 GRTDWKP---------EISVPSVVGTAPASK--TLTFKTLADTYLEERKEDVKASSMRSM 212
           GR D +P          ++  S     PASK  ++        +L E K   KA + +  
Sbjct: 121 GRLDQEPYHQEFMQAARVAASSAPTPDPASKIPSVAIGKAVALWLAEIKPSTKAKTFKIK 180

Query: 213 KACCDILVGVLGEMD-MATHSRADLVGVRETLKEGR--KPVTVNKIVTQMTTILNWAVDN 269
               +      GE + +    R D+      L+ G+   P  VNK  + +    +WA   
Sbjct: 181 TTAVEGFAKHYGEKNPLKDAGRIDVGAWVMALRAGKLETPTIVNKC-SYLRGFFDWAKAR 239

Query: 270 GHI------------KQAFGKKLQLTKGAESGRIPFSQEQIAKLIQCANSLPADDWKRWA 317
           G+             +  +G + +  K    G  PF+ EQI  L          +  RW 
Sbjct: 240 GYYPPFAKDENPAAGQVVYGPR-EKRKRRALGFKPFTNEQIQALYSPTALEGLSEAARWG 298

Query: 318 VTLGVISGARIGEIHQLTTVDIVEIDNVLVMDINTNDG--KGTKNKFSIRKVPLVDIYGV 375
             +G+ +GAR+ E+ QLT  D VE+D +  + I TN+G  +  K++ SIR +P V    +
Sbjct: 299 AWVGLYTGARVAEVGQLTLADFVEVDGIPCIRI-TNEGECQSVKSEVSIRTIP-VHPKLI 356

Query: 376 DLEALKAFAE---ASNGKLFKRTL-------GSFYG-VLNKFIRETLGIQTKGGLSFHSL 424
           +L  LK  ++   A   +LF +         G++     ++ +  T+G   KG L FHSL
Sbjct: 357 ELGLLKRVSDLRKAEEKRLFPKVKVDGVNGPGNWLSKAFSRHVLATVGKPEKGKLGFHSL 416

Query: 425 RHFVAGSLKAAEVPLGTAQEILGHSSGSITFDLYGSGRSVQMQRMAEALK 474
           R  V   L++A V        +GH         Y   R+  M+ + +A++
Sbjct: 417 RKTVVQGLQSAGVTAELRAAYVGHELDDEHHGAY--SRAPTMRELLDAVE 464