Pairwise Alignments

Query, 607 a.a., excinuclease ABC subunit C from Pseudomonas simiae WCS417

Subject, 613 a.a., excinuclease ABC subunit UvrC from Rhodanobacter sp000427505 FW510-R12

 Score =  667 bits (1721), Expect = 0.0
 Identities = 342/608 (56%), Positives = 436/608 (71%), Gaps = 9/608 (1%)

Query: 4   PFDPSAFLSTCSGRPGVYRMFDSEARLLYVGKAKNLKNRLASYFRKSGLAPKTAALVARI 63
           PFD  AF+ T +  PGVYR FD+   LLYVGKA NLK R+ SYF K  + P+ AA+VA+I
Sbjct: 8   PFDGKAFVRTLTTSPGVYRHFDAAGELLYVGKAGNLKKRVGSYFLKPRMEPRIAAMVAQI 67

Query: 64  AQVETTITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDG-NFPRLSIHRGAK 122
           A+VE T+T  E EALLLE  LIK  +P YNILLRDDKSYPY++LS G ++PRL+ HRGAK
Sbjct: 68  ARVEITVTRTEGEALLLESQLIKSLKPRYNILLRDDKSYPYIYLSTGEDYPRLAFHRGAK 127

Query: 123 KQKGKYFGPYPSAGAIRESLSLLQKTFFVRQCEDSFYKNRTRPCLQYQIKRCKAPCVGLV 182
              G+YFGPYPS  A+RESL+L+QK F VRQCEDS+++NRTRPCL YQI RC APCVGL+
Sbjct: 128 NLPGRYFGPYPSVYAVRESLNLMQKLFKVRQCEDSYFRNRTRPCLLYQIGRCSAPCVGLI 187

Query: 183 EPAEYAEDVRHSVMFLEGRSNALTDELSGAMEQAASTLDFERAAELRDQISLLRRVQDQQ 242
              +Y  DVRH+ MFLEGRSNA+ DEL+ AMEQA+  L FERAA+LRDQ++ LR++Q Q 
Sbjct: 188 SVEDYRNDVRHAEMFLEGRSNAVIDELAEAMEQASKALQFERAAKLRDQVAALRQLQAQH 247

Query: 243 SMEGGTGDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQTGIDEDVAEVMAAFLGQY 302
            ++G + D+DV+A  +  G ACV ++  R G  LG+++FFP+  +D + A+V+A F+ QY
Sbjct: 248 HVQGASADMDVLACRIEAGMACVSVLFFRDGISLGTRDFFPRLPLDAEPADVLAQFITQY 307

Query: 303 YVSSPERDLPSELIVNVVHEDFPTLIEAIHELRGRELDISHRVRGTRARWQQLAVTNAEQ 362
           Y+   +R +P ELI+     D   L E + +  G  +D+   VRG RA++ Q+A  NA+ 
Sbjct: 308 YL---DRPVPRELILGEPLADQEILAELLGQQAGHAVDLKSSVRGERAQFLQMAERNAQA 364

Query: 363 ALSARLANRQHVAARFDALAEVLNLDEPPQRLECYDISHSSGEATVASCVVFGPEGPIKS 422
           +L+ARLA+RQ +  RFD L +VL LDE P+R+EC+DISH+ GE TVASCVVFGPEGP KS
Sbjct: 365 SLTARLASRQTLGTRFDDLQKVLGLDESPRRIECFDISHTMGELTVASCVVFGPEGPEKS 424

Query: 423 DYRRYNIEGVTAGDDYAAMHQALTRRFSKLKDGEGKLPDILLVDGGKGQLSMARDVLNEL 482
            YRR+NI G+T GDDYAAMHQALTRRF KL +GEG  PD+LL+DGG GQ++ A  VL EL
Sbjct: 425 HYRRFNITGITPGDDYAAMHQALTRRFRKLAEGEGARPDVLLIDGGSGQVAQALGVLREL 484

Query: 483 AVPDLILLGVAKGATRKAGFETLYL-----NDAAHEFTLKGDSPALHLIQQIRDEAHRFA 537
            V  + ++GVAKG  R+AG ETL L          E      SPALHL+  +RDEAHRFA
Sbjct: 485 GVDGIEVVGVAKGPGRRAGEETLVLARLESGSPGRELHPGSSSPALHLVAAVRDEAHRFA 544

Query: 538 ITGHRARRGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIDEIAKAPGISKKLA 597
           I+GHR RR K R  S LE V G+G  RR  LLK FGG+Q L RA ++E+ +  GI + LA
Sbjct: 545 ISGHRKRREKAREHSVLEDVPGIGARRRSALLKAFGGMQGLERAGVEELMQVKGIDRGLA 604

Query: 598 ELIYANLH 605
           E IYA+LH
Sbjct: 605 ERIYASLH 612