Pairwise Alignments

Query, 607 a.a., excinuclease ABC subunit C from Pseudomonas simiae WCS417

Subject, 786 a.a., UvrABC system protein C from Xanthobacter sp. DMC5

 Score =  338 bits (868), Expect = 4e-97
 Identities = 184/439 (41%), Positives = 264/439 (60%), Gaps = 7/439 (1%)

Query: 18  PGVYRMFDSEARLLYVGKAKNLKNRLASYFRKSGLAPKTAALVARIAQVETTITANETEA 77
           PGVYRM  ++  +LYVGKAK++K R+ SY R  G   + A ++A  AQ+E   T  E EA
Sbjct: 105 PGVYRMIAADGTVLYVGKAKSIKKRVLSYTRPVGHTNRIARMIAGTAQMEFVSTRTEPEA 164

Query: 78  LLLEQTLIKEWRPPYNILLRDDKSYPYVFLS-DGNFPRLSIHRGAKKQKGKYFGPYPSAG 136
           LLLE  LIK+ +P +N+LLRDDKS+PY+ ++ D   P+++ HRGA+ + G Y+GP+ S  
Sbjct: 165 LLLEANLIKQLKPRFNVLLRDDKSFPYILITADHVSPQIAKHRGARNRPGDYYGPFASVW 224

Query: 137 AIRESLSLLQKTFFVRQCEDSFYKNRTRPCLQYQIKRCKAPCVGLVEPAEYAEDVRHSVM 196
           A+  +++ L++ F +R C DS+Y+NRTRPCL +QIKRC  PC G V   +YAE VR +  
Sbjct: 225 AVDRTINALERAFLLRSCSDSYYENRTRPCLLFQIKRCAGPCTGEVSHQDYAELVREARA 284

Query: 197 FLEGRSNALTDELSGAMEQAASTLDFERAAELRDQISLLRRVQDQQSME-GGTGDVDVIA 255
           FL GRS A+ +EL+  MEQAA  L+FERAA LRD+++ L  VQ  Q +   G  + DV A
Sbjct: 285 FLSGRSRAIKEELAKEMEQAAEELEFERAARLRDRLAALSAVQGSQGINPRGVEEADVFA 344

Query: 256 AFVNPGGACVHLISVRGGRVLGSKNFFPQTGIDEDVAEVMAAFLGQYYVSSPERDLPSEL 315
                G  CV +   R G+  G++ ++P+       AEV+ AFL Q+Y   P    P  L
Sbjct: 345 CHQQGGATCVEVFFFRTGQNWGNRAYYPRADRSLTEAEVLGAFLAQFYEDKP---CPRLL 401

Query: 316 IVNVVHEDFPTLIEAIHELRGRELDISHRVRGTRARWQQLAVTNAEQALSARLANRQHVA 375
           +++   E+   L +A+ E  G  ++I+   RG +      A+ NA +AL+  LA     A
Sbjct: 402 LLSHKVEEQELLADALSEKAGYRVEIAVPQRGEKRDLVDHALQNAREALARTLAESATQA 461

Query: 376 ARFDALAEVLNLDEPPQRLECYDISHSSGEATVASCVVFGPEGPIKSDYRRYNIEG--VT 433
              + +A    L  PPQR+E YD SH  G   V   +V GPEG  KS YR++NI+   + 
Sbjct: 462 KLLEGVAATFGLKAPPQRIEVYDNSHIMGTNAVGGMIVAGPEGFRKSQYRKFNIKSADLV 521

Query: 434 AGDDYAAMHQALTRRFSKL 452
            GDD+  M + LTRRF++L
Sbjct: 522 PGDDFGMMREVLTRRFARL 540



 Score =  134 bits (338), Expect = 1e-35
 Identities = 69/151 (45%), Positives = 98/151 (64%), Gaps = 1/151 (0%)

Query: 455 GEGKLPDILLVDGGKGQLSMARDVLNELAVPDLILLGVAKGATRKAGFETLYLNDAAHEF 514
           G    PD++L+DGG GQL+ AR VL EL + D+ L+G+AKG  R+AG E  +L      F
Sbjct: 632 GASPWPDLVLIDGGLGQLNAARKVLEELGITDVPLVGIAKGLDREAGREQFFLPGRT-PF 690

Query: 515 TLKGDSPALHLIQQIRDEAHRFAITGHRARRGKTRRTSTLEGVAGVGPTRRRDLLKHFGG 574
            ++   P L+ IQ++RDEAHRFAI  HRARR K    + L+ + GVGPTR+R LL+HFG 
Sbjct: 691 RMEPRDPVLYYIQRLRDEAHRFAIGSHRARRKKDITEAGLQAIPGVGPTRKRALLRHFGT 750

Query: 575 LQELSRASIDEIAKAPGISKKLAELIYANLH 605
           L+ + RAS+ ++ +  GI+   A+ +Y   H
Sbjct: 751 LKAIERASLADLEQVAGINAGTAKAVYDYFH 781