Pairwise Alignments

Query, 607 a.a., excinuclease ABC subunit C from Pseudomonas simiae WCS417

Subject, 610 a.a., Excinuclease ABC subunit C from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  609 bits (1571), Expect = e-179
 Identities = 316/610 (51%), Positives = 427/610 (70%), Gaps = 8/610 (1%)

Query: 1   MSTPFDPSAFLSTCSGRPGVYRMFDSEARLLYVGKAKNLKNRLASYFRKSGLAPKTAALV 60
           +S  FD  AFL T + +PGVYRM+D+   ++YVGKAK+LK RL+SYFR +  + KT ALV
Sbjct: 1   VSEIFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALV 60

Query: 61  ARIAQVETTITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGNFPRLSIHRG 120
           A+I  ++ T+T  ETEALLLE   IK ++P YN+LLRDDKSYP++FLS    PRL++HRG
Sbjct: 61  AQIQHIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRG 120

Query: 121 AKKQKGKYFGPYPSAGAIRESLSLLQKTFFVRQCEDSFYKNRTRPCLQYQIKRCKAPCV- 179
           AK  KG+YFGP+P+  A+RE+L+LLQK F +RQCE+S Y+NR+RPCLQYQI RC  PCV 
Sbjct: 121 AKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVA 180

Query: 180 GLVEPAEYAEDVRHSVMFLEGRSNALTDELSGAMEQAASTLDFERAAELRDQISLLRRVQ 239
           GLV   EYA+ V +  +FL G+ + +  +L   ME+A+  L FE AA +RDQI  +RRV 
Sbjct: 181 GLVSEEEYAQQVEYVRLFLSGKDDQVLTQLIARMEKASQDLAFEEAARIRDQIQAVRRVT 240

Query: 240 DQQSMEGGTGDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQTGIDEDVAEVMAAFL 299
           ++Q +     D+DVI    + G ACVH++ +R G+VLGS+++FP+     ++ EV+  F+
Sbjct: 241 EKQFVSNAGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELGEVVETFV 300

Query: 300 GQYYV-SSPERDLPSELIVNVVHEDFPTLIEAIHELRGRELDISHRVRGTRARWQQLAVT 358
           GQ+Y+  S  R LP E++++    D   L +++ EL GR + +  + RG RAR+ +LA T
Sbjct: 301 GQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLSELAGRRIHVQTKPRGDRARYLKLART 360

Query: 359 NAEQALSARLANRQHVAARFDALAEVLNLDEPPQRLECYDISHSSGEATVASCVVFGPEG 418
           NA  AL  +L+ +  +  R  ALA VL L    +R+EC+DISH+ GE TVASCVVF   G
Sbjct: 361 NAATALITKLSQQSTITQRLSALAAVLKL-PAIKRMECFDISHTMGEQTVASCVVFDANG 419

Query: 419 PIKSDYRRYNIEGVTAGDDYAAMHQALTRRFSKLKDGEGKLPDILLVDGGKGQLSMARDV 478
           P++++YRRYNI G+T GDDYAAM+Q L RR+ K  + E K+PD++L+DGGKGQL+ A+ V
Sbjct: 420 PLRAEYRRYNIAGITPGDDYAAMNQVLRRRYGKAIE-ESKIPDVILIDGGKGQLAQAKAV 478

Query: 479 LNELAVP----DLILLGVAKGATRKAGFETLYLNDAAHEFTLKGDSPALHLIQQIRDEAH 534
             EL VP      +LLGVAKGA RKAG ETL+       F+L  DSPALH+IQ IRDE+H
Sbjct: 479 FAELDVPWDKHRPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESH 538

Query: 535 RFAITGHRARRGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIDEIAKAPGISK 594
             AI GHR +R K + TSTLE + GVGP RR+ LLK+ GGLQ L  AS++EIAK PGIS+
Sbjct: 539 DHAIGGHRKKRAKVKNTSTLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQ 598

Query: 595 KLAELIYANL 604
            LAE I+ +L
Sbjct: 599 GLAEKIFWSL 608