Pairwise Alignments

Query, 607 a.a., excinuclease ABC subunit C from Pseudomonas simiae WCS417

Subject, 607 a.a., excinuclease ABC subunit UvrC from Erwinia amylovora T8

 Score =  597 bits (1538), Expect = e-175
 Identities = 310/603 (51%), Positives = 420/603 (69%), Gaps = 8/603 (1%)

Query: 5   FDPSAFLSTCSGRPGVYRMFDSEARLLYVGKAKNLKNRLASYFRKSGLAPKTAALVARIA 64
           FD  +FL T + +PGVYRM+D+   ++YVGKAK+LK RLASYFR +  + KT ALV  I 
Sbjct: 2   FDSKSFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLASYFRGNLASRKTEALVGLIE 61

Query: 65  QVETTITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGNFPRLSIHRGAKKQ 124
           Q++ T+T  ETEALLLE   IK ++P YN+LLRDDKSYPY+FLS  + PRL+ HRGAK  
Sbjct: 62  QIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPYIFLSADHHPRLASHRGAKHA 121

Query: 125 KGKYFGPYPSAGAIRESLSLLQKTFFVRQCEDSFYKNRTRPCLQYQIKRCKAPCV-GLVE 183
           KG+YFGP+P+  A+RE+LSLLQK F VRQCE+S Y+NR+RPCLQYQI RC  PCV GLV 
Sbjct: 122 KGEYFGPFPNGYAVRETLSLLQKIFPVRQCENSVYRNRSRPCLQYQIGRCLGPCVAGLVT 181

Query: 184 PAEYAEDVRHSVMFLEGRSNALTDELSGAMEQAASTLDFERAAELRDQISLLRRVQDQQS 243
             EYA  + +  +FL G+ + + ++L   MEQA+  L FE A  LRDQI  +RRV ++Q 
Sbjct: 182 EDEYARQIDYVRLFLAGKDDQVLNQLVTRMEQASRDLRFEEAGRLRDQIQAVRRVTEKQF 241

Query: 244 MEGGTGDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQTGIDEDVAEVMAAFLGQYY 303
           +     D+DVI    + G AC+H++ +R G+VLGS+++FP+     +++EV+  F+GQ+Y
Sbjct: 242 VSNQGDDMDVIGVSYDSGMACLHVLFIRQGKVLGSRSYFPKVPGGTELSEVVQTFVGQFY 301

Query: 304 VSSPE-RDLPSELIVNVVHEDFPTLIEAIHELRGRELDISHRVRGTRARWQQLAVTNAEQ 362
           +   E R LP++++++    +   L  ++ EL GR + I  + RG RAR+ +LA TNA  
Sbjct: 302 LQGSEARTLPADILIDFTLPEKELLAASLSELAGRRVTIQSKPRGDRARYLKLARTNAAT 361

Query: 363 ALSARLANRQHVAARFDALAEVLNLDEPPQRLECYDISHSSGEATVASCVVFGPEGPIKS 422
           AL +RLA    +  R   LA+ L L    +R+EC+DISH+ GE TVASCVVF   GP++S
Sbjct: 362 ALISRLAQHSTIHQRLAELAQTLKL-PAIRRMECFDISHTMGEQTVASCVVFDANGPVRS 420

Query: 423 DYRRYNIEGVTAGDDYAAMHQALTRRFSKLKDGEGKLPDILLVDGGKGQLSMARDVLNEL 482
           +YRRYNI G+T GDDYAAM Q L RR+SK  + + K+PD++++DGGKGQL+ A++V  +L
Sbjct: 421 EYRRYNISGITPGDDYAAMDQVLRRRYSKAIE-QSKIPDVIVIDGGKGQLAQAKEVFAQL 479

Query: 483 AV----PDLILLGVAKGATRKAGFETLYLNDAAHEFTLKGDSPALHLIQQIRDEAHRFAI 538
            V       +LLGVAKG+ RKAG ETL+L      F+L  DSPALH+IQ IRD++H  AI
Sbjct: 480 DVVWDKSHPLLLGVAKGSDRKAGLETLFLEPEGEGFSLPPDSPALHVIQHIRDDSHNHAI 539

Query: 539 TGHRARRGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIDEIAKAPGISKKLAE 598
           TGHR +R K + TS LE + G+GP RR+ LLK+ GGLQ L  AS++EIA  PGIS  LAE
Sbjct: 540 TGHRNKRAKVKNTSALETIEGIGPKRRQMLLKYMGGLQPLINASMEEIAGVPGISHALAE 599

Query: 599 LIY 601
            I+
Sbjct: 600 KIF 602