Pairwise Alignments

Query, 607 a.a., excinuclease ABC subunit C from Pseudomonas simiae WCS417

Subject, 610 a.a., excinuclease ABC subunit UvrC from Erwinia tracheiphila SCR3

 Score =  597 bits (1540), Expect = e-175
 Identities = 314/611 (51%), Positives = 420/611 (68%), Gaps = 10/611 (1%)

Query: 1   MSTPFDPSAFLSTCSGRPGVYRMFDSEARLLYVGKAKNLKNRLASYFRKSGLAPKTAALV 60
           M+  FD  +FL + + +PGVYRM+D+E  ++YVGKAK+LK RL+SYFR +  + KT ALV
Sbjct: 1   MNDVFDAKSFLQSVTSQPGVYRMYDAEGTVIYVGKAKDLKKRLSSYFRGTQGSRKTEALV 60

Query: 61  ARIAQVETTITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGNFPRLSIHRG 120
             I Q++ T+T  ETEALLLE   IK ++P YN+LLRDDKSYP +FLS    PRL+ HRG
Sbjct: 61  GSIYQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPSIFLSADKHPRLASHRG 120

Query: 121 AKKQKGKYFGPYPSAGAIRESLSLLQKTFFVRQCEDSFYKNRTRPCLQYQIKRCKAPCV- 179
           AK  KG YFGP+P+  A+RE+LSLLQK F VRQCE+S Y NR+RPCLQYQI RC  PCV 
Sbjct: 121 AKHAKGDYFGPFPNGYAVRETLSLLQKIFPVRQCENSVYHNRSRPCLQYQIGRCLGPCVK 180

Query: 180 GLVEPAEYAEDVRHSVMFLEGRSNALTDELSGAMEQAASTLDFERAAELRDQISLLRRVQ 239
           GLV   EYA+   +  +FL G+ + +  +L   ME A+  L FE AA LRDQI  +RRV 
Sbjct: 181 GLVSEEEYAQQTEYVRLFLSGKDDQVLKQLVRRMEAASQALKFEEAARLRDQIQAVRRVT 240

Query: 240 DQQSMEGGTGDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQTGIDEDVAEVMAAFL 299
           ++Q +     D+DVI    + G AC+H++ +R G+VLGS+++FP+     +++EV+  FL
Sbjct: 241 ERQFVSNNGDDLDVIGVAFDAGMACMHVLFIRQGKVLGSRSYFPKVPGGTELSEVVQTFL 300

Query: 300 GQYYV-SSPERDLPSELIVNVVHEDFPTLIEAIHELRGRELDISHRVRGTRARWQQLAVT 358
           GQ+Y+  S  R LP +++++    +   L  ++ E+ GR + I    RG RAR+ +LA T
Sbjct: 301 GQFYLQGSQTRTLPGDILLDFFLPEKELLAASLTEMVGRRVSIQSNPRGDRARYLKLACT 360

Query: 359 NAEQALSARLANRQHVAARFDALAEVLNLDEPPQRLECYDISHSSGEATVASCVVFGPEG 418
           NA  AL +RL+ +  +  R  ALAE+L+L     R+EC+DISH+ GE TVASCVVF   G
Sbjct: 361 NASTALLSRLSQQSTIHQRLQALAELLDL-PTINRMECFDISHTMGEQTVASCVVFDNNG 419

Query: 419 PIKSDYRRYNIEGVTAGDDYAAMHQALTRRFSK-LKDGEGKLPDILLVDGGKGQLSMARD 477
           P++S+YRRYNI G+T GDDYAAM+Q L RR+ K L D   K+PD++L+DGGKGQL  A++
Sbjct: 420 PLRSEYRRYNITGITPGDDYAAMNQVLCRRYGKDLID--SKIPDVILIDGGKGQLGQAKN 477

Query: 478 VLNELAV----PDLILLGVAKGATRKAGFETLYLNDAAHEFTLKGDSPALHLIQQIRDEA 533
           V  +L V       ILLGVAKG  RKAG ETL+       F+L  DSPALH+IQ IRD++
Sbjct: 478 VFADLNVNWDKERPILLGVAKGTARKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDDS 537

Query: 534 HRFAITGHRARRGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIDEIAKAPGIS 593
           H +AITGHR +R K + TS LE + G+GP RR+ LLK+ GGLQ L  A++DEI K PGIS
Sbjct: 538 HNYAITGHRNKRAKVKNTSALESIEGIGPKRRQMLLKYMGGLQPLMNATVDEIEKVPGIS 597

Query: 594 KKLAELIYANL 604
           K LAE I+ +L
Sbjct: 598 KLLAEKIFYSL 608