Pairwise Alignments

Query, 607 a.a., excinuclease ABC subunit C from Pseudomonas simiae WCS417

Subject, 610 a.a., excinuclease ABC subunit UvrC from Escherichia coli ECRC101

 Score =  615 bits (1586), Expect = e-180
 Identities = 317/610 (51%), Positives = 434/610 (71%), Gaps = 8/610 (1%)

Query: 1   MSTPFDPSAFLSTCSGRPGVYRMFDSEARLLYVGKAKNLKNRLASYFRKSGLAPKTAALV 60
           +S  FD  AFL T + +PGVYRM+D+   ++YVGKAK+LK RL+SYFR +  + KT ALV
Sbjct: 1   VSDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALV 60

Query: 61  ARIAQVETTITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGNFPRLSIHRG 120
           A+I Q++ T+T  ETEALLLE   IK ++P YN+LLRDDKSYP++FLS    PRL++HRG
Sbjct: 61  AQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRG 120

Query: 121 AKKQKGKYFGPYPSAGAIRESLSLLQKTFFVRQCEDSFYKNRTRPCLQYQIKRCKAPCV- 179
           AK  KG+YFGP+P+  A+RE+L+LLQK F +RQCE+S Y+NR+RPCLQYQI RC  PCV 
Sbjct: 121 AKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVE 180

Query: 180 GLVEPAEYAEDVRHSVMFLEGRSNALTDELSGAMEQAASTLDFERAAELRDQISLLRRVQ 239
           GLV   EYA+ V +  +FL G+ + +  +L   ME A+  L+FE AA +RDQI  +RRV 
Sbjct: 181 GLVSEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETASQNLEFEEAARIRDQIQAVRRVT 240

Query: 240 DQQSMEGGTGDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQTGIDEDVAEVMAAFL 299
           ++Q +     D+DVI    + G ACVH++ +R G+VLGS+++FP+     +++EV+  F+
Sbjct: 241 EKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELSEVVETFV 300

Query: 300 GQYYV-SSPERDLPSELIVNVVHEDFPTLIEAIHELRGRELDISHRVRGTRARWQQLAVT 358
           GQ+Y+  S  R LP E++++    D   L +++ EL GR++++  + RG RAR+ +LA T
Sbjct: 301 GQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLSELAGRKINVQTKPRGDRARYLKLART 360

Query: 359 NAEQALSARLANRQHVAARFDALAEVLNLDEPPQRLECYDISHSSGEATVASCVVFGPEG 418
           NA  AL+++L+ +  V  R  ALA VL L E  +R+EC+DISH+ GE TVASCVVF   G
Sbjct: 361 NAATALTSKLSQQSTVHQRLTALASVLKLPE-VKRMECFDISHTMGEQTVASCVVFDANG 419

Query: 419 PIKSDYRRYNIEGVTAGDDYAAMHQALTRRFSKLKDGEGKLPDILLVDGGKGQLSMARDV 478
           P++++YRRYNI G+T GDDYAAM+Q L RR+ K  D + K+PD++L+DGGKGQL+ A++V
Sbjct: 420 PLRAEYRRYNITGITPGDDYAAMNQVLRRRYGKAID-DSKIPDVILIDGGKGQLAQAKNV 478

Query: 479 LNELAVP----DLILLGVAKGATRKAGFETLYLNDAAHEFTLKGDSPALHLIQQIRDEAH 534
             EL V       +LLGVAKGA RKAG ETL+       F+L  DSPALH+IQ IRDE+H
Sbjct: 479 FAELDVSWDKNHPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESH 538

Query: 535 RFAITGHRARRGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIDEIAKAPGISK 594
             AI GHR +R K + TS+LE + GVGP RR+ LLK+ GGLQ L  AS++EIAK PGIS+
Sbjct: 539 DHAIGGHRKKRAKVKNTSSLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQ 598

Query: 595 KLAELIYANL 604
            LAE I+ +L
Sbjct: 599 GLAEKIFWSL 608