Pairwise Alignments

Query, 607 a.a., excinuclease ABC subunit C from Pseudomonas simiae WCS417

Subject, 457 a.a., DNA repair nuclease with dnaQ and GIY-YIG domains (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 54.7 bits (130), Expect = 8e-12
 Identities = 61/248 (24%), Positives = 102/248 (41%), Gaps = 30/248 (12%)

Query: 19  GVYRMFDSEARLLYVGKAKNLKNRLASYFRKSGLAPKTAALVARIAQVETTITANETEAL 78
           GVY   D+  +++YVGKA N+++R   +F  SG       + + I  V   +T +E  AL
Sbjct: 200 GVYYFHDANGKVIYVGKALNIRHRFKGHF--SGAGKGKQGMKSAIYDVSFQLTGSEFLAL 257

Query: 79  LLEQTLIKEWRPPYNILLRDDKSYP---YVFLSDGNFPRLSIHRGAKKQKGKYFGPYPSA 135
           L+E   IK+  P YN   +  K+ P   Y +     F R  +      +  ++  P  + 
Sbjct: 258 LVEALEIKQHWPKYN-RAQKAKNAPWGIYRYQDGQGFERFQV-----AKINRFTKPLLAF 311

Query: 136 GAIRESLS-LLQKTFFVRQCED-SFYKNRTRPCLQYQIKRCKAPCVGLVEPAEYAEDVRH 193
            +  E+ S LL+K    + C      +     C  +Q   C   C G  EP+ Y   V  
Sbjct: 312 HSHHEAWSYLLEKIEKHQLCAKLCGVQKSASACFDHQAGACLGACCGEEEPSSYNTRVED 371

Query: 194 SVMFLEGRSNALTDELSG--AMEQAA---------------STLDFERAAELRDQISLLR 236
            +  ++   + L     G    EQAA               S  +F+    + DQ+ +++
Sbjct: 372 WLQEIQREKSRLLIREKGRHPNEQAAIYFEDGVLKAYGFIDSEAEFDTDEAVIDQLEMVK 431

Query: 237 RVQDQQSM 244
            V D  S+
Sbjct: 432 PVGDTSSI 439