Pairwise Alignments

Query, 607 a.a., excinuclease ABC subunit C from Pseudomonas simiae WCS417

Subject, 600 a.a., excinuclease ABC, C subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  303 bits (777), Expect = 1e-86
 Identities = 198/590 (33%), Positives = 316/590 (53%), Gaps = 33/590 (5%)

Query: 18  PGVYRMFDSEARLLYVGKAKNLKNRLASYFRKS-GLAPKTAALVARIAQVETTITANETE 76
           PGVY+ ++ E +L+YVGKAK+LK R+ASYF KS GL  KT  +V  I ++E TI  +E +
Sbjct: 18  PGVYKYYNEEDKLIYVGKAKSLKKRVASYFVKSTGLNLKTRRMVKEIRRIEFTIVNSEFD 77

Query: 77  ALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGNFPRLSIHRGAKKQKGKYFGPYPSAG 136
           ALLLE  LIK+ +P YNILL+DDK+YPY+ L+  +FP+L   R     +G YFGP+ S  
Sbjct: 78  ALLLENNLIKKNQPRYNILLKDDKTYPYLLLTKEHFPQLYPTRKLIPSRGTYFGPFASVK 137

Query: 137 AIRESLSLLQKTFFVRQCEDSF--YK---NRTRPCLQYQIKRCKAPCVGLVEPAEYAEDV 191
           A+   L L++  F +R C+     YK    + + CL+Y I  C  PC GL    +Y +D+
Sbjct: 138 AMNNILELIRSLFTIRTCKLDLNPYKIAEQKYKVCLEYHIGNCLGPCEGLQGEPDYLKDI 197

Query: 192 RHSVMFLEGRSNALTDELSGAMEQAASTLDFERAAELRDQISLLRRVQDQQSMEG-GTGD 250
             +   L+G            M++AA  L FE+A   +D++ LL + Q +  +      D
Sbjct: 198 DQAKHILKGNLGIPKAYFKSKMQEAAEDLAFEKAQRFKDKLDLLEKYQAKSLVTNPHVTD 257

Query: 251 VDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQTGIDEDVAEVMAAFLGQYYVSSPERD 310
           +DV A       A V+ ++++ G +  +K    +  +DE   E++   +  + +    + 
Sbjct: 258 LDVFAIVSADKFAFVNYLNIKNGAINITKTVELKKKLDETEQELLLTAI--FRLKDQFQS 315

Query: 311 LPSELIVNVVHEDFPTLIEAIHELRGRELDISHRVRGTRARWQQLAVTNA-----EQALS 365
              E++ N+   D    IE +H        ++    G + +  +LA+ NA     E+AL 
Sbjct: 316 DAKEILSNI---DLDDPIEGLH--------LTVPKIGDKRKLVELALKNAMYYKKEKALL 364

Query: 366 ARLANRQHVAARFDALAEVLNLDEPPQRLECYDISHSSGEATVASCVVFGPEGPIKSDYR 425
           +  A  +        L + L+L E P  +EC+D S+  G   VAS V F    P K +YR
Sbjct: 365 SGKAKEKKNRVILQ-LQKDLSLKEAPDHIECFDNSNIQGAYPVASMVCFMDGKPAKKEYR 423

Query: 426 RYNIEGVTAGDDYAAMHQALTRRFSKLKDGEGKLPDILLVDGGKGQLSMARDVLNELAVP 485
            ++++ V   DD+A+M + + RR+ +L      LP ++++DGGKGQLS A + L  L + 
Sbjct: 424 HFHVKTVEGPDDFASMTEIVGRRYKRLLKENKPLPKLIVIDGGKGQLSAAVEALKSLDIY 483

Query: 486 DLI-LLGVAKGATRKAGFETLYLNDAAHEFTLKGDSPALHLIQQIRDEAHRFAITGHRAR 544
             + ++G+AK        E +Y    +    +   S +L LIQ++RDEAHRFAIT HR  
Sbjct: 484 GQVPIIGIAK------KLEEIYFPGDSFPLHIDKKSESLRLIQRVRDEAHRFAITFHRDI 537

Query: 545 RGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIDEIAKAPGISK 594
           R K    + L+ + G+GP+    LLKH+  L+++  AS +++A+  G  K
Sbjct: 538 RSKDSFKTALDTIEGIGPSTSNKLLKHYKSLKKIREASEEDLAQIIGKDK 587