Pairwise Alignments

Query, 607 a.a., excinuclease ABC subunit C from Pseudomonas simiae WCS417

Subject, 642 a.a., excinuclease ABC chain C from Agrobacterium fabrum C58

 Score =  439 bits (1130), Expect = e-127
 Identities = 244/620 (39%), Positives = 359/620 (57%), Gaps = 28/620 (4%)

Query: 10  FLSTCSGRPGVYRMFDSEARLLYVGKAKNLKNRLASYFRKSGLAPKTAALVARIAQVETT 69
           F+      PGVYRMF+    +LYVGKA++LK R+ +Y +    + + A +V     +E  
Sbjct: 22  FVKHLPNSPGVYRMFNEAGDVLYVGKARSLKKRVGNYAQGRVHSNRIAQMVRFTTHMEFV 81

Query: 70  ITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLS-DGNFPRLSIHRGAKKQKGKY 128
            T  ETEALLLE  LIK  RP +N+LLRDDKS+PY+ ++ D   P +  HRGA+ +KG Y
Sbjct: 82  TTRTETEALLLEANLIKRLRPRFNVLLRDDKSFPYILITADNRAPAIFKHRGARARKGDY 141

Query: 129 FGPYPSAGAIRESLSLLQKTFFVRQCEDSFYKNRTRPCLQYQIKRCKAPCVGLVEPAEYA 188
           FGP+ SAGA+  +++ LQ+ F +R C DS ++ RTRPCL YQIKRC  PC   V    YA
Sbjct: 142 FGPFASAGAVGRTINSLQRAFLIRTCTDSVFETRTRPCLLYQIKRCSGPCTHEVSDEGYA 201

Query: 189 EDVRHSVMFLEGRSNALTDELSGAMEQAASTLDFERAAELRDQISLLRRVQDQQSME-GG 247
           E V+ +  FL G+S A+   ++  M +A+  LDFERAA  RD+++ L  VQ  Q +   G
Sbjct: 202 ELVKEAKDFLSGKSQAVKTAIARQMNEASEDLDFERAAIYRDRLAALSHVQSHQGINPAG 261

Query: 248 TGDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQTGIDEDVAEVMAAFLGQYYVSSP 307
             + DV A     G +C+ +   R G+  G++ +FP+       +E++ AFL Q+Y   P
Sbjct: 262 IEEADVFAIHHEGGISCIQVFFFRTGQNWGNRAYFPKADPSLPGSEILNAFLAQFYDDKP 321

Query: 308 ERDLPSELIVNVVHEDFPTLIEAIHELRGRELDISHRVRGTRARWQQLAVTNAEQALSAR 367
              +P +++++   E+   L  A+ E  G ++ IS   RG +       + NA +A   +
Sbjct: 322 ---VPKQILLSETVEEQELLAAALGEKAGHKVTISVPQRGEKKDITDHVLANAREAHGRK 378

Query: 368 LANRQHVAARFDALAEVLNLDEPPQRLECYDISHSSGEATVASCVVFGPEGPIKSDYRRY 427
           LA     A      AE  NL   P+R+E YD SH  G   V   VV GPEG +K+ YR++
Sbjct: 379 LAETSSQARLLKGFAETFNLPYVPRRIEIYDNSHIMGTNAVGGMVVAGPEGFVKNQYRKF 438

Query: 428 NIEG--VTAGDDYAAMHQALTRRFSKLKDGEGK-------------------LPDILLVD 466
           NI+   +T GDD+  M + +TRRFS+L   EGK                    PD++L+D
Sbjct: 439 NIKSTDITPGDDFGMMREVMTRRFSRLLKEEGKPDRAQTPTPEEAADLPFPAWPDVILID 498

Query: 467 GGKGQLSMARDVLNELAVPDLI-LLGVAKGATRKAGFETLYLNDAAHEFTLKGDSPALHL 525
           GG+GQ++  R +L+EL + D +  +GVAKG  R+AG E  +  D   +F+L    P L+ 
Sbjct: 499 GGQGQMTAVRAILDELGIRDCVTAIGVAKGVDREAGRERFFA-DGRSDFSLPPRDPVLYF 557

Query: 526 IQQIRDEAHRFAITGHRARRGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIDE 585
           IQ++RDEAHRFAI  HRARR K    + L+ ++G+GP R+R LL+HFG  + +SRA +++
Sbjct: 558 IQRMRDEAHRFAIGSHRARRKKEMVRNPLDEISGIGPGRKRSLLQHFGTAKAVSRAGLND 617

Query: 586 IAKAPGISKKLAELIYANLH 605
           +    GIS+ +A  IY + H
Sbjct: 618 LMTVTGISETVARQIYNHFH 637