Pairwise Alignments

Query, 371 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 346 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  293 bits (750), Expect = 5e-84
 Identities = 165/345 (47%), Positives = 222/345 (64%), Gaps = 7/345 (2%)

Query: 32  VRFINLGKTYDGT-----VHALQGIDLAIQRGEVFGIIGRSGAGKSSLIRTINRLEQPSS 86
           V F  + KT+ G        AL GID  + +G +  IIGRSGAGKS+LIR  N LE+PS+
Sbjct: 2   VTFEGVTKTFGGADGKPGFAALAGIDYTVPKGSITCIIGRSGAGKSTLIRLANGLEKPST 61

Query: 87  GRVLIDQVDIGAFDEDRLVALRRRIGMIFQHFNLMSAKTVWQNVELPLKVAGIPKLQREQ 146
           GRV++D VD+ A DE  L  LRR +GMIFQHFNL+S++T + NV LPL++AG+ K + E 
Sbjct: 62  GRVVVDGVDVAALDEKSLRTLRRSVGMIFQHFNLLSSRTAFDNVALPLEIAGLGKKEIEA 121

Query: 147 KVRELLELVGLKDKHKAYPAQLSGGQKQRVGIARSLVHDPEILLCDEATSALDPETTQSI 206
           +V  LL+LVGL DK K YPA+LSGGQKQRVGIAR+L   P++LL DEATSALDPETTQSI
Sbjct: 122 RVAPLLDLVGLSDKAKRYPAELSGGQKQRVGIARALATQPKLLLSDEATSALDPETTQSI 181

Query: 207 LGLLREINQRLGLTIVLITHEMAVIREICDRVVVLEHGRIVEQGPVWQVFGDPQHAVSKT 266
           L LL+ IN  LGLT++LITHEM V++ I  +V V++ G IVE+G  + +F  P+H  +++
Sbjct: 182 LELLKRINAELGLTVLLITHEMEVVKTIASQVAVIDRGLIVEEGTTFDIFTAPKHETTRS 241

Query: 267 LL-APLQHGLPEELQSRLQARPATADAAVVLRLQFTGSDTDEPDLAALFSALGGRVRLLQ 325
           LL + +   LP  + S L+ + AT    V++RL F G    +P  A L + +G  V +L 
Sbjct: 242 LLSSSVGVKLPHWVTSGLK-QEATDGDRVLVRLVFFGETAFQPLTARLVAEIGPDVNILA 300

Query: 326 GGVERIQGHALGQLLLAVNGSPHTAEELRNRAGNWAQQVEVLGHV 370
           G +E I G   G L+++   S                  EVLG+V
Sbjct: 301 GTIEEISGQPFGSLVVSYPASAEVTARANRFYAETGLHTEVLGYV 345