Pairwise Alignments

Query, 386 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

Subject, 384 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

 Score =  216 bits (550), Expect = 9e-61
 Identities = 142/376 (37%), Positives = 202/376 (53%), Gaps = 15/376 (3%)

Query: 14  DAVRSFVAKELLPHEEAVDRADAVSPELAAQIRDKAIAAGFYAFNMPEEVGGGGLDYLSQ 73
           D+VR    + + P    +D  D    EL     D     G     +PE  GG G +    
Sbjct: 12  DSVRRMAERHVAPIAAEIDENDRFPTELIPVYGD----IGLLQLWVPEAYGGPGANLTMV 67

Query: 74  ALIERELSKVSWALHVFVARPSKILMAC----TGSQIGDYLLPCVQGKKVDCFALTEPGA 129
            +   E+S+ S A  +     +  ++      T +Q   +L    QG+ +   AL+EPGA
Sbjct: 68  CMAREEISRHSEACGLLAGETTMFVLPLMHFGTEAQKQRFLPIVAQGRTLTAIALSEPGA 127

Query: 130 GSDANAIKTRAVRSGDDFVINGSKHFISHAGHADFAIVFAVTDTYEHNGRQRNAVTSFLV 189
           GSD +AI+TRAVR GD +VING K + S    AD+ +VFA T     +    + ++ F+V
Sbjct: 128 GSDVSAIRTRAVRDGDSYVINGQKQWCSFGSVADYIMVFAKTS----DAGGVDNISPFIV 183

Query: 190 DRGT-PGMTIRRGPKCVSNRGYHTYEMFFDDCRVPASKVLGEVGKGWEVANAWLTAGRVM 248
           D  T PG++  +  + +  RG     ++ D+ RVPA  +LGE GKG+  A   L   R  
Sbjct: 184 DVKTMPGVSFGKKERKMGMRGAVNVPVYLDNVRVPAENMLGEEGKGFRAAMRALDLNRPA 243

Query: 249 VAANCVGQAQRALDVSLQWAADRKQFGQPIGTYQGVSFKLADMATQIRAAELLTLHTAWK 308
           +AA  VG AQ ALD ++ +A  RKQF + I  +QGV F LADMA QI+AA  L       
Sbjct: 244 IAAASVGLAQGALDAAVAYAQQRKQFKRFISEFQGVQFMLADMAMQIQAARCLLYECTRA 303

Query: 309 MDQG--SMTDGEAGMAKLFASETLGKVADEAVQIFGGMGLMDEGPVERIWRNARIERIWE 366
            D+G        A MAK FAS+   KV  +AVQ+ GG G   + PVER+ R+A++ +I+E
Sbjct: 304 GDRGEWDRLPMLASMAKCFASDMAMKVTTDAVQVLGGYGYTKDYPVERMMRDAKLNQIFE 363

Query: 367 GTSEIQRHIIARELLR 382
           GT++IQR +IARELLR
Sbjct: 364 GTNQIQRVVIARELLR 379