Pairwise Alignments

Query, 386 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

Subject, 376 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

 Score =  242 bits (617), Expect = 1e-68
 Identities = 149/381 (39%), Positives = 213/381 (55%), Gaps = 13/381 (3%)

Query: 5   LSQEQDMLVDAVRSFVAKELLPHEEAVDRADAVSPELAAQIRDKAIAAGFYAFNMPEEVG 64
           L+ +Q+ + DAVR F   EL P+    DR  +   E    +     A G Y   +PEE G
Sbjct: 3   LNADQEAIRDAVRDFSQAELWPNAPKWDREHSFPKEAHQGLA----ALGAYGICVPEEHG 58

Query: 65  GGGLDYLSQALIERELSK----VSWALHVFVARPSKILMAC-TGSQIGDYLLPCVQGKKV 119
           G GLDYL+ AL+  E++      S A+ V     + ILM      Q   +L P  QGK +
Sbjct: 59  GAGLDYLTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQKKQWLEPLAQGKML 118

Query: 120 DCFALTEPGAGSDANAIKTRAVRSGDDFVINGSKHFISHAGHADFAIVFAVTDTYEHNGR 179
             F LTEP AGSDA++++T A + GD +VI+G K FI+   +   AIV AVTD     G 
Sbjct: 119 GAFCLTEPQAGSDASSLRTTARKDGDAYVIDGVKQFITSGKNGQVAIVIAVTD----KGA 174

Query: 180 QRNAVTSFLVDRGTPGMTIRRGPKCVSNRGYHTYEMFFDDCRVPASKVLGEVGKGWEVAN 239
            +  +++FLV    PG  + R    +      T ++ FD CR+P   ++G  G+G+++A 
Sbjct: 175 GKRGMSAFLVPTDAPGYNVARLEDKLGQHSSDTAQINFDGCRIPVENLIGAEGEGYKIAL 234

Query: 240 AWLTAGRVMVAANCVGQAQRALDVSLQWAADRKQFGQPIGTYQGVSFKLADMATQIRAAE 299
             L  GR+ +AA  VG A+ A DV+L +A +R+ FG  I   Q V F+LA+ ATQ+ AA 
Sbjct: 235 GALEGGRIGIAAQSVGMARSAFDVALAYAKERQAFGGSIFDQQAVGFRLAECATQLEAAR 294

Query: 300 LLTLHTAWKMDQGSMTDGEAGMAKLFASETLGKVADEAVQIFGGMGLMDEGPVERIWRNA 359
            L  H A   D G     EA MAKLFASE   +V   A+Q  GG G +++ P+ERI+R+ 
Sbjct: 295 QLIWHAAALRDAGRPCLKEAAMAKLFASEMAERVCSAAIQTLGGYGYVNDFPLERIYRDV 354

Query: 360 RIERIWEGTSEIQRHIIAREL 380
           R+ +I+EGTS+IQ+ +I R L
Sbjct: 355 RVCQIYEGTSDIQKLLIQRAL 375