Pairwise Alignments

Query, 386 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

Subject, 380 a.a., Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) from Sphingobium sp. HT1-2

 Score =  204 bits (520), Expect = 3e-57
 Identities = 136/387 (35%), Positives = 203/387 (52%), Gaps = 18/387 (4%)

Query: 3   FQLSQEQDMLVDAVRSFVAKELLPHEEAVDRADAVSPELAAQIRDKAIAAGFYAFNMPEE 62
           F L+ EQ  + +  + F A  + PH    D       +   Q    A   GF A  + EE
Sbjct: 4   FDLTDEQRAVQELAQRFTADAITPHAAKWDEDHHFPRDTIRQ----AAELGFGAIYVSEE 59

Query: 63  VGGGGLDYLSQALIERELSKVSWALHVFVARPSKILMACTGSQIGD------YLLPCVQG 116
            GG GL  L  ALI   ++    +   F++  +  + A    + GD      YL   V  
Sbjct: 60  SGGIGLGRLESALIMEAMAYGCPSTSAFISIHN--MAAWMIDRFGDEAVKQRYLPSLVTC 117

Query: 117 KKVDCFALTEPGAGSDANAIKTRAVRSGDDFVINGSKHFISHAGHADFAIVFAVTDTYEH 176
           + +  + LTEP AGSDA +++TRAV  GD +V+ GSK FIS  G  D  +V   T     
Sbjct: 118 ETIASYCLTEPSAGSDAASLRTRAVLDGDHYVVTGSKAFISGGGENDIYVVMVRTGEDGP 177

Query: 177 NGRQRNAVTSFLVDRGTPGMTIRRGPKCVSNRGYHTYEMFFDDCRVPASKVLGEVGKGWE 236
            G     ++  ++++   G++     + +      T ++ FD  RVP +  +G  G+G+ 
Sbjct: 178 KG-----ISCLVIEKNMEGVSFGAQERKLGWHSQPTAQVNFDGVRVPVANRVGAEGQGFA 232

Query: 237 VANAWLTAGRVMVAANCVGQAQRALDVSLQWAADRKQFGQPIGTYQGVSFKLADMATQIR 296
           +A A L  GR+ + A  +G AQRALD ++ +  DR+QF + I  +Q   F LADM T+++
Sbjct: 233 IAMAGLDGGRLNIGACSLGGAQRALDEAVGYTRDRRQFDRAIADFQNTQFTLADMETELQ 292

Query: 297 AAELLTLHTAWKMDQGSMTDGE-AGMAKLFASETLGKVADEAVQIFGGMGLMDEGPVERI 355
           AA  L    A K+ +G+    + A MAK FA++T   VAD A+Q+ GG G + + PVERI
Sbjct: 293 AARSLLYLAAAKVSEGAPDKTKFAAMAKRFATDTGSAVADRALQLHGGYGYLMDYPVERI 352

Query: 356 WRNARIERIWEGTSEIQRHIIARELLR 382
           WR+ R+ RI EGT+EI R I ARELL+
Sbjct: 353 WRDLRVHRILEGTNEIMRMITARELLK 379