Pairwise Alignments

Query, 386 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  238 bits (607), Expect = 2e-67
 Identities = 141/381 (37%), Positives = 213/381 (55%), Gaps = 13/381 (3%)

Query: 5   LSQEQDMLVDAVRSFVAKELLPHEEAVDRADAVSPELAAQIRDKAIAAGFYAFNMPEEVG 64
           ++ EQ  + DAVR+F  + L P  E  D+      E      D+    G +   +PE+ G
Sbjct: 3   VNDEQQQIADAVRAFAQERLKPFAEQWDKDHRFPKEAI----DEMAELGLFGMLVPEQWG 58

Query: 65  GGGLDYLSQALIERELSKVSWALHVFVARPSK-----ILMACTGSQIGDYLLPCVQGKKV 119
           G    Y++ A+   E++    A    ++  +      IL      Q   +L P   G  +
Sbjct: 59  GSDTGYVAYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQKEQFLTPLATGAML 118

Query: 120 DCFALTEPGAGSDANAIKTRAVRSGDDFVINGSKHFISHAGHADFAIVFAVTDTYEHNGR 179
             FALTEP AGSDA+++KTRA   GD +V+NGSK FI+   +A   IVFAVTD       
Sbjct: 119 GAFALTEPQAGSDASSLKTRARLEGDHYVLNGSKQFITSGQNAGVVIVFAVTDPEAG--- 175

Query: 180 QRNAVTSFLVDRGTPGMTIRRGPKCVSNRGYHTYEMFFDDCRVPASKVLGEVGKGWEVAN 239
            +  +++F+V   +PG  + R    +      T ++ FD+ +VP +  LG  G+G+++A 
Sbjct: 176 -KRGISAFIVPTDSPGYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLGAEGEGYKIAL 234

Query: 240 AWLTAGRVMVAANCVGQAQRALDVSLQWAADRKQFGQPIGTYQGVSFKLADMATQIRAAE 299
           A L  GR+ +A+  VG A+ A +V+  +A +R+ FG+P+  +Q V+F+LADMAT+I  A 
Sbjct: 235 ANLEGGRIGIASQAVGMARAAFEVARDYANERQSFGKPLIEHQAVAFRLADMATKISVAR 294

Query: 300 LLTLHTAWKMDQGSMTDGEAGMAKLFASETLGKVADEAVQIFGGMGLMDEGPVERIWRNA 359
            + LH A   D G     EA MAKLFASE   KV  +A+Q  GG G + + P+ERI+R+ 
Sbjct: 295 QMVLHAAALRDAGRPALVEASMAKLFASEMAEKVCSDALQTLGGYGYLSDFPLERIYRDV 354

Query: 360 RIERIWEGTSEIQRHIIAREL 380
           R+ +I+EGTS+IQR +IAR L
Sbjct: 355 RVCQIYEGTSDIQRMVIARNL 375