Pairwise Alignments

Query, 1204 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1172 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  231 bits (589), Expect = 3e-64
 Identities = 159/534 (29%), Positives = 275/534 (51%), Gaps = 26/534 (4%)

Query: 554  GWVLYLRNLIHKRAQAEQALSDQMRFMSVLIDGTPHPIYVRDRQGRLMACNNAYLDVFGF 613
            G++    ++  ++   +  L ++ R  S  +   P  + + D + + +A ++ +++++G 
Sbjct: 379  GYLGVATDITDEKKATQNLLIERARLHS-FVKHVPAAVAMLDNELKFIAYSDKWIEMYGL 437

Query: 614  KLEDVIGKTVVQTDTGNPPQAQSFHADYLSLMERGEP-QIQDRVLKVPGGGVLTIYQWML 672
            + ED+IGK+  +  T    + Q  H   L     GE  + ++ V +  G       +W +
Sbjct: 438  EKEDLIGKSHYEIFTNISEEWQEVHRRGLG----GEVIKCEEDVWRPEGWSHDQYVRWEI 493

Query: 673  -PYRDSNGAVVGMIAGWVDVSERQRLLGQLQEAKEEADAANRAKTTFLATMSHEIRTPMN 731
             P+  S   + G++    D++E       LQ++   A+ ANRAK+ FLA MSHEIRTP+N
Sbjct: 494  RPWYRSKEKIGGILMLTEDITEAYFQKNDLQQSMRHAEQANRAKSEFLANMSHEIRTPLN 553

Query: 732  AVIGMIELAQKNAEQGRVDQDALEVASMASRSMLELIGDILDIARIETGHLSLSLEQANL 791
             +IG  +L  K     R +Q  L + + ++ S+L +I DILD ++IE G L L +E+ +L
Sbjct: 554  GIIGFSDLVLKTELNDRQEQ-YLSIVNQSANSLLNIINDILDFSKIEAGKLDLDIERYDL 612

Query: 792  HELLASVARVFEGLARDKGLLLQVELDPMIDRAVLIDPLRFKQVVSNLLGNAIKFTATGQ 851
            +EL+   + +   +   KGL + + + P I R   ID +R KQV+ NLLGNA KFT  G+
Sbjct: 613  YELVEQASDIITYVIHQKGLEMLLNISPNIPRFAWIDSVRLKQVLVNLLGNASKFTDKGE 672

Query: 852  VRLGAQSTP---TLAGDHLSLRLCVEDTGIGISAEDQQRLFSPFIQGSNNDQSARSGSGL 908
            + L  + TP   +     + +R  V DTGIGI +E Q ++F  F Q   +      G+GL
Sbjct: 673  IEL--KLTPLSNSNKNGEMDIRFSVRDTGIGIKSEKQDKIFEAFSQEDVSTTKKYGGTGL 730

Query: 909  GLVISRNLCEMMGGQLHLSSVLGKGTRVDLTLTLATATATPVYAPAPPAPATHALNLLVV 968
            GL IS  L ++MG +L L+S   +G+     L +       +  P    P  H   +L+V
Sbjct: 731  GLTISNRLLQLMGSKLQLTSTPNRGSTFYFDLRIKCEDGQAI--PLEGEPNLH--KILIV 786

Query: 969  DDYPANRLLLARQLSFLGHRIVTAEDGAEGFALWQDG-QFDGVITDSNMPIMDGYTLARD 1027
            DD   NR+++ R L+  G + V A++G E      DG ++D ++ D  MP ++G   AR 
Sbjct: 787  DDNANNRMIIERMLALKGIQTVQAKNGYEAIQRLVDGEEYDVILMDFQMPYLNGIDTARK 846

Query: 1028 IRAQERQRGLVPCLLLGFTANAQPEET--ERCRQAGMDGCLFKPTGLDDLRTAL 1079
            IRA  +++ ++      F  ++  ++T     ++  +   L KP  + D+  AL
Sbjct: 847  IRANFKEQPII------FLHSSSEDKTISLASKELSIPHRLIKPIKMQDMYDAL 894



 Score = 50.4 bits (119), Expect = 8e-10
 Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 6/124 (4%)

Query: 954  APPAPATHALNLLVVDDYPANRLLLARQLSFLGHR--IVTAEDGAEGFALWQDGQFDGVI 1011
            APP   T   ++L V+D   N LL    +  +  +  ++ A +G +   L +    D + 
Sbjct: 914  APPL-LTEKSSILFVEDNAINMLLGKTVIHNISPKTTVLEASNGKQALELLKVNLPDMIF 972

Query: 1012 TDSNMPIMDGYTLARDIRAQERQRGLVPCLLLGFTANAQPEETERCRQAGMDGCLFKPTG 1071
             D  MP M+GY   + IR + + + L   L+   TA     E E+C +AGMD  + KP  
Sbjct: 973  MDVQMPEMNGYEATKIIRKEYKNKNL---LIFALTAGNLKGEKEKCMEAGMDDFIAKPFV 1029

Query: 1072 LDDL 1075
             +DL
Sbjct: 1030 EEDL 1033