Pairwise Alignments

Query, 1204 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 956 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  221 bits (564), Expect = 2e-61
 Identities = 160/528 (30%), Positives = 256/528 (48%), Gaps = 27/528 (5%)

Query: 561  NLIHKRAQAEQALSDQMRFMSVLIDGTPHPIYVRDRQGRLMACNNAYLDVFGFKLEDVIG 620
            ++  K     + +  + R  SVL +  P  I++ D QG  +       D+     E  +G
Sbjct: 431  DITEKYLAERELIKSENRLRSVL-NSLPDIIFIYDNQGVYLDYYVQESDMLISPPELSLG 489

Query: 621  KTVVQTDTGNPPQAQSFHADYLSLMERGEPQIQDRVLKVPGGGVLTIYQWMLPYRDSNGA 680
            K +   D   PP  +   +  L   + G+ Q +   L +P G      +  L  R     
Sbjct: 490  KHI--RDIIPPPYGEKMESALLRAAKTGKVQTEQMTLDLPSG------KKFLEIRFFKLD 541

Query: 681  VVGMIAGWVDVSERQRLLGQLQEAKEEADAANRAKTTFLATMSHEIRTPMNAVIGMIELA 740
               MI+   DV+E++     L+EAKE A+ ANRAK+ FLA+MSHEIRTPMN ++GMI L 
Sbjct: 542  EERMISVGRDVTEQKLWEKGLKEAKEVAEGANRAKSEFLASMSHEIRTPMNGLLGMIGLL 601

Query: 741  QKNAEQGRVDQDALEVASMASRSMLELIGDILDIARIETGHLSLSLEQANLHELLASVAR 800
            + + +     Q  ++V   +  S+L +I DILD ++IE G L L L  +   E L  V  
Sbjct: 602  E-HTKMDDEQQSIVKVIKDSGESLLVIIKDILDYSKIEEGKLELELSSSKFREELNKVIN 660

Query: 801  VFEGLARDKGLLLQVELDPMIDRAVLIDPLRFKQVVSNLLGNAIKFTAT-GQVRLGAQST 859
            +F G+   K L L +++ P I + +++D  +  Q++ N++GNA+KFT   G V +     
Sbjct: 661  IFSGMVVGKELSLNLDIAPTIPQWLILDNEKLSQILFNIIGNAVKFTPKGGDVSIKVSGE 720

Query: 860  PTLAGDHLSLRLCVEDTGIGISAEDQQRLFSPFIQGSNNDQSARSGSGLGLVISRNLCEM 919
            P L   +  L   V+DTG+GI      +L +PF Q        +SGSGLGL I+  L E+
Sbjct: 721  PIL-DKNFMLYFNVKDTGVGIPKSKIDQLINPFTQTGRGTAEEKSGSGLGLAIANKLIEL 779

Query: 920  MGGQLHLSSVLGKGTRVDLTLTLATATATPVYAP---APPAPATHALN---------LLV 967
            MGG L + S +GKG+    T+    + +            A   + L+         +L+
Sbjct: 780  MGGSLQIESEVGKGSEFSFTVFARISDSEEKVGKDDYEKYAKEEYKLSHISDKFPKEILL 839

Query: 968  VDDYPANRLLLARQLSFLGHRIVTAEDGAEGFALWQDGQFDGVITDSNMPIMDGYTLARD 1027
             +D   N   +   +  LG+ + T   G E     Q  ++D +  D  MP+MDG   +R+
Sbjct: 840  AEDNDINLKFMKLLMKQLGYSVDTVSTGEEAVKAVQKKRYDMIFMDYQMPVMDGLEASRE 899

Query: 1028 IRAQERQRGLVPCLLLGFTANAQPEETERCRQAGMDGCLFKPTGLDDL 1075
            I+  +  + +    ++G +AN   E+ ER  +AGMD  L KP  + D+
Sbjct: 900  IKKMKEGKYI---RIIGLSANVFKEDIERAYEAGMDDYLTKPIKIQDV 944