Pairwise Alignments

Query, 214 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 294 a.a., Glycine betaine/choline transport system permease protein OusW from Azospirillum sp. SherDot2

 Score = 83.2 bits (204), Expect = 5e-21
 Identities = 60/204 (29%), Positives = 107/204 (52%), Gaps = 27/204 (13%)

Query: 13  TLLMVGVSSLIALLVGIPLAVFLVTSDKGGIYQAPALNRVLGAFV----NLFRSIPFLIL 68
           TL +V  ++L++LL+G+PL V++            A NRV+ + V    +  +++P  + 
Sbjct: 91  TLGLVLTATLLSLLIGVPLGVWM------------ARNRVVESIVRTTLDFMQTMPAFVY 138

Query: 69  MVALIPFTRLIVGTTYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLIEAAQAMGCRRW 128
           ++  + F  L  G   G+ A V    I A P   R+  + +++V   ++EA +A GC   
Sbjct: 139 LIPAVMFFGL--GRVPGILATV----IFAMPPAVRLTSLGIQQVPAEIVEAGKAFGCHDR 192

Query: 129 HIIWHVLLPEALPGIVGGFTITLVTMINSSAMAGAIGAGGLGDIAYRYGYQRFDTQI--- 185
            +++ V LP ALP I+ G   T++  ++   +A  IGAGGLG++  + G QR D  +   
Sbjct: 193 QLLFKVQLPNALPSIMAGVNQTMMMALSMIVIASMIGAGGLGNVVLQ-GIQRLDIALGFE 251

Query: 186 -MLTVIVLLVLLVAVIQLGGDRLA 208
             L+V++L ++L  + Q  G   A
Sbjct: 252 SGLSVVLLAIVLDRITQSFGQTAA 275