Pairwise Alignments

Query, 390 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 384 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  478 bits (1230), Expect = e-139
 Identities = 230/361 (63%), Positives = 280/361 (77%)

Query: 28  VLVLWVALSNQWSWPGYAEMVASLPHPVAWLRWIVGDISEVAFYKHELASLGLLSGAYLA 87
           +LV   A      W  YA+ VA+L  P++ LRWIVGDISEVAFYKHEL +LGLL GA LA
Sbjct: 20  LLVFLAASLGHGQWLDYAQRVATLDEPLSRLRWIVGDISEVAFYKHELPALGLLLGACLA 79

Query: 88  WWASKHGKAWQGFSISYGTGLWPWLVTSSLLGLMLSNLLWGWSVTAQTWQPTFAAFVSLP 147
            WA   G  WQGF+I YG+GLWPW+ TSSLLGL+LS++LWGW++ + TWQPTF AFVSLP
Sbjct: 80  HWAQLRGYRWQGFAICYGSGLWPWVFTSSLLGLLLSHVLWGWTLASGTWQPTFVAFVSLP 139

Query: 148 AAMVLMFGGGWKVAVNGAVLGALLVTPICMLIVNFVCVPLGLPVVIGNVVGMAIGSVIAF 207
           AAMVL+FG GW+V + GA+LGALLVTP  +L+VN++C PL LPVV+GNV GMA+ SV+AF
Sbjct: 140 AAMVLLFGAGWRVTITGALLGALLVTPAGLLMVNYLCYPLQLPVVVGNVSGMAVASVVAF 199

Query: 208 VLCRRVPSLVSSDYIAPAKPAPARPPTYGIVWSLRRVLADFSEAPFFGNELASLGLLAGV 267
           +LC+R PS V               P YG+VW+LRRVLADFSEAPFFGNELASLGLL GV
Sbjct: 200 ILCKRFPSWVRQCGEPTVVAPVVNQPDYGVVWTLRRVLADFSEAPFFGNELASLGLLLGV 259

Query: 268 LVAYALNPISPAYGSGLVLPLLAAQALTSALGVAIWRKQWMKRGWYPTYVPLVSVVPAAV 327
           L+AY L+P + +YGS LV+ ++A QAL S +GV +WR QW  RGWYPTY+P+VS+VPAAV
Sbjct: 260 LLAYLLSPAALSYGSMLVMQMVAGQALASLVGVVLWRGQWKARGWYPTYIPIVSIVPAAV 319

Query: 328 LTHGGSWTVIASSALLGALIAPPLASAIAGRLPVHFHPYIGNVTSMALSTLMIVPLVGWL 387
           LTHGGSW V+ +SA+LGAL+APPLA AI  RLP + H YIGNV SMA+ TL IVP+VG L
Sbjct: 320 LTHGGSWQVVVASAVLGALVAPPLAVAITQRLPAYVHGYIGNVVSMAICTLGIVPVVGLL 379

Query: 388 I 388
           +
Sbjct: 380 V 380