Pairwise Alignments
Query, 496 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417
Subject, 1098 a.a., histidine kinase from Pseudomonas simiae WCS417
Score = 112 bits (281), Expect = 5e-29
Identities = 63/282 (22%), Positives = 136/282 (48%), Gaps = 7/282 (2%)
Query: 113 RSLVITDSRGEPELLVLILSDATEWASAEQR-------FEKTFNANPAPAVICRLSDLRY 165
R+ + D +G P + L D T+ EQR F F +P P + L +
Sbjct: 376 RARLYRDEQGAPLRMAGTLLDITDQVEREQRLTASEEKFASLFQVSPDPICVTCLDGGTF 435
Query: 166 IKVNQGFLEMTGYNRDQVIGKSVYELDVLEQAERKDLAIQRLGEGATIPQMQAELRLPEG 225
I++N F + G+ +VI KS ++ + +++ ++ I+R+ + + G
Sbjct: 436 IEINPAFTQTFGWTAAEVIDKSAEQIGLWDESSKRLQRIERVIREQALSNVAIVAHHKNG 495
Query: 226 GSKLVIVAGQPLDMNEEDCMLFSFMDLEPRRKAEIALRQSEERFAKSFRLTPVPTLVCSA 285
+ +++ + + + ++ C++ + D+ ++++E AL+ SEE+FAK+F +P +
Sbjct: 496 QALTCVISSRLIKVGDQPCIVTTLRDITQQQRSEAALKASEEKFAKAFHSSPDAISITER 555
Query: 286 SNRQVVDINEAFMSITGYTSEELIGKSIEDISFIDSPQAGAQLFTTLEKAGNLDGQDLKV 345
+ V++N+ F +TGY +EE IG ++ I A L L+ G ++ ++
Sbjct: 556 DTGRYVEVNDGFCRLTGYRAEEAIGLTLYQIGIWADENQRAALLAELQIKGRINYLEMLW 615
Query: 346 RKKGNEVIDCVVSADTVIIEDVPCYLLVMMNITERKRSELEL 387
K E++ VS + + + + PC LL +++ K ++ ++
Sbjct: 616 HNKRGELLAVEVSVEPITLNETPCLLLTARDVSLLKNAQAQI 657
Score = 77.4 bits (189), Expect = 2e-18
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 5/203 (2%)
Query: 195 EQAERKDLAIQRLGEGATIPQMQAELRLP-EGGSKLVIVAGQPLDMNEEDC---MLFSFM 250
++ E A + L EG Q R+P E GS + + L +E+ M + +
Sbjct: 337 DERESMRNAYRTLREGPA-GNYQLTYRVPMEDGSSRYLESRARLYRDEQGAPLRMAGTLL 395
Query: 251 DLEPRRKAEIALRQSEERFAKSFRLTPVPTLVCSASNRQVVDINEAFMSITGYTSEELIG 310
D+ + + E L SEE+FA F+++P P V ++IN AF G+T+ E+I
Sbjct: 396 DITDQVEREQRLTASEEKFASLFQVSPDPICVTCLDGGTFIEINPAFTQTFGWTAAEVID 455
Query: 311 KSIEDISFIDSPQAGAQLFTTLEKAGNLDGQDLKVRKKGNEVIDCVVSADTVIIEDVPCY 370
KS E I D Q + + L + K + + CV+S+ + + D PC
Sbjct: 456 KSAEQIGLWDESSKRLQRIERVIREQALSNVAIVAHHKNGQALTCVISSRLIKVGDQPCI 515
Query: 371 LLVMMNITERKRSELELVAAIEE 393
+ + +IT+++RSE L A+ E+
Sbjct: 516 VTTLRDITQQQRSEAALKASEEK 538
Score = 62.8 bits (151), Expect = 6e-14
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 7/149 (4%)
Query: 122 GEPELLVLILSDATEWA-------SAEQRFEKTFNANPAPAVICRLSDLRYIKVNQGFLE 174
G+ +V L D T+ ++E++F K F+++P I RY++VN GF
Sbjct: 510 GDQPCIVTTLRDITQQQRSEAALKASEEKFAKAFHSSPDAISITERDTGRYVEVNDGFCR 569
Query: 175 MTGYNRDQVIGKSVYELDVLEQAERKDLAIQRLGEGATIPQMQAELRLPEGGSKLVIVAG 234
+TGY ++ IG ++Y++ + ++ + L I ++ G V V+
Sbjct: 570 LTGYRAEEAIGLTLYQIGIWADENQRAALLAELQIKGRINYLEMLWHNKRGELLAVEVSV 629
Query: 235 QPLDMNEEDCMLFSFMDLEPRRKAEIALR 263
+P+ +NE C+L + D+ + A+ +R
Sbjct: 630 EPITLNETPCLLLTARDVSLLKNAQAQIR 658
Score = 59.7 bits (143), Expect = 5e-13
Identities = 55/234 (23%), Positives = 101/234 (43%), Gaps = 4/234 (1%)
Query: 158 CRLSDLRYIKVNQGFLEMTGYNRDQVIGKSVYELDVL--EQAERKDLAIQRLGEGATIPQ 215
C D I ++G + G++ Q + + LD+L E + R A + G Q
Sbjct: 45 CWEIDSGRISWSRGTQALFGFDPRQPLPNDLDYLDLLAPEDSARVVRAFHAVLAGEPFEQ 104
Query: 216 -MQAELRLPEGGSKLVIVAGQPL-DMNEEDCMLFSFMDLEPRRKAEIALRQSEERFAKSF 273
M ++ P+G + + G D M+ ++ +R E AL SE+RFA F
Sbjct: 105 AMHHHIQWPDGSLHWLEINGSLAPDKAGRRRMIGVIREITHQRDRENALSHSEKRFATLF 164
Query: 274 RLTPVPTLVCSASNRQVVDINEAFMSITGYTSEELIGKSIEDISFIDSPQAGAQLFTTLE 333
L P L+ ++ + + N+ F + G+ + IG++ D+ P+ AQL +
Sbjct: 165 HLCPNMVLLTRQADGLISEANQYFEMLFGWPLADAIGRTTLDLGLWRHPEQRAQLVKATQ 224
Query: 334 KAGNLDGQDLKVRKKGNEVIDCVVSADTVIIEDVPCYLLVMMNITERKRSELEL 387
+ G +++ ++ D +SA V +E + ++ TERK +E L
Sbjct: 225 RKGEPITMEVQFCASNGQIHDGTLSAQKVELEGEAYLISTFLDTTERKNAEQAL 278
Score = 47.4 bits (111), Expect = 3e-09
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Query: 140 AEQRFEKTFNANPAPAVICRLSDLRYIKVNQGFLEMTGYNRDQVIGKSVYELDVLEQAER 199
+E+RF F+ P ++ R +D + NQ F + G+ IG++ +L + E+
Sbjct: 156 SEKRFATLFHLCPNMVLLTRQADGLISEANQYFEMLFGWPLADAIGRTTLDLGLWRHPEQ 215
Query: 200 KDL---AIQRLGEGATIPQMQAELRLPEGGSKLVIVAGQPLDMNEEDCMLFSFMDLEPRR 256
+ A QR GE T M+ + G ++ Q +++ E ++ +F+D R+
Sbjct: 216 RAQLVKATQRKGEPIT---MEVQFCASNGQIHDGTLSAQKVELEGEAYLISTFLDTTERK 272
Query: 257 KAEIALRQSEER 268
AE AL+ S+ER
Sbjct: 273 NAEQALKDSQER 284