Pairwise Alignments

Query, 397 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 395 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

 Score =  248 bits (633), Expect = 2e-70
 Identities = 139/384 (36%), Positives = 215/384 (55%), Gaps = 12/384 (3%)

Query: 10  RTVNLLLSATLLLTLAKAITFPYLVIYLTSHFALDITQVGLVIGSSLIVGSLLSVYGGFL 69
           R+ + LL+++LLLT+ +  T P++ IYL+  ++L +  +G  +  +L +G + S+  G L
Sbjct: 7   RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGIL 66

Query: 70  VDRINSYRLLLAFSVLFVLGFIGTVLARNIWAFYSCLILINLAYAVIDIAVKAGFASLLP 129
            D+ +  R +L     F  GFI   L  N+        LIN AY+V    +KA FA  L 
Sbjct: 67  ADKFDKKRYMLLAITAFASGFIAITLVNNVTLVVLFFALINCAYSVFATVLKAWFADNLS 126

Query: 130 EDARSEVFSIKYTLTNIGYAVGPFFGAMIAKLDISLPFILSALLGVSFFLLYWRWGDRT- 188
             +++++FSI YT+ NIG+ +GP  G ++    I+LPF L+A+      L    W  R+ 
Sbjct: 127 STSKTKIFSINYTMLNIGWTIGPPLGTLLVMQSINLPFWLAAICSAFPMLFIQIWVKRSE 186

Query: 189 ---LTTVDATQKPVPFLAVGRVLLRDHRLVCFTLGGVLSAVVFGQFTAWLSQYLVTTTTA 245
               T   +   P       +VLL+D  L+ FT  G L++ V G F + +SQY++     
Sbjct: 187 KIIATETGSVWSP-------KVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVIADG 239

Query: 246 EYTYTVVSAVLTTNAVLVITLQYVIGRRISHRYLGQWLIAGLGMFMLGIVGFALS-TSVL 304
           ++   VV+ VL  NA +V+TLQY +GRR++   +   + AG   F++G+VGF  S  S+L
Sbjct: 240 DFAEKVVAVVLPVNAAMVVTLQYSVGRRLNPANIRALMTAGTLCFVIGLVGFIFSGNSLL 299

Query: 305 WWVLAMAVFTVGEIIVFPAEYMFIDRIAPDHLRGMYYGAQNLSNLGAALGPVLCGLVLAS 364
            W ++ AVFTVGEII  P EYM ID IAP  ++  Y+ AQ+L  LGAA+ P++ G+VL S
Sbjct: 300 LWGMSAAVFTVGEIIYAPGEYMLIDHIAPPEMKASYFSAQSLGWLGAAINPLVSGVVLTS 359

Query: 365 LPAHYMFYMLGAFIVGGGVFYFIG 388
           LP   +F +L   I+   V    G
Sbjct: 360 LPPSSLFVILALVIIAAWVLMLKG 383