Pairwise Alignments

Query, 185 a.a., Cro/Cl family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 175 a.a., DNA-binding protein from Pseudomonas simiae WCS417

 Score = 51.2 bits (121), Expect = 1e-11
 Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 9/169 (5%)

Query: 17  LRKHKKLTLAQLAQKIERSVGFLSQVERGLSRPTVADLTAISHALDVPTTYFYSQPKPKA 76
           LRK   +TL  LA+K   +  +LS+VERGL+ P++A    ++ AL+V     +S+     
Sbjct: 8   LRKKLGVTLEALAEKSGMTKSYLSKVERGLNTPSIAAALKLAKALNVKVEELFSEDSVSL 67

Query: 77  VDW-ITRPNERRTVYYANGITDILVSPSMNGAFSMLDSLLAPGANSGEQTMSDR-AEQAG 134
             + + R +ER        +    VS       S+L  ++ P A   ++T  +   E+  
Sbjct: 68  DSYSLVRSHERPDTSPGYAVLAHQVSER-----SLLPFIIYPPAEFTDKTFKEHLGEEFL 122

Query: 135 FVLEGELTLWVEGEADSVTLGPGDSFHLASFAHCRYANLTDLPARVLWV 183
           FV EG++   V+   + V L  GD+ H  +    R  ++ D+ A++L V
Sbjct: 123 FVHEGQVE--VDFMNERVILERGDALHFNAQKPHRLRSVGDVQAQLLVV 169