Pairwise Alignments

Query, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 304 a.a., HTH-type transcriptional regulator HdfR from Xanthobacter sp. DMC5

 Score =  133 bits (335), Expect = 4e-36
 Identities = 80/282 (28%), Positives = 145/282 (51%), Gaps = 4/282 (1%)

Query: 1   MFDWNDLRYFLELQRSGRLLTAAQRLKTTHATVARHIEAIEKSLGTALFVQHAQGYELTP 60
           M  W+D R    +  +G L  AA++L   H+TV R +  +E+ LG  LF +   GY  TP
Sbjct: 1   MIPWDDFRLVRAIAETGSLAGAAEQLAVNHSTVFRRLGTLEQQLGARLFERARAGYVPTP 60

Query: 61  AGEALLKHAEAMENVALLAEDELT-HSAAPLGKIRLGVAEGLGVMFLASRMGGLFDRYPG 119
            GE +++ AE M +  L  E  +T     P G++R+   + L V  L        + YP 
Sbjct: 61  MGEEMVRLAEHMADEVLAVERRITGQDLRPSGELRVTTNDTLLVHMLTPIFASFREAYPE 120

Query: 120 LEVELVAVPRFVSILNREAEISIHLERPSVDQLVTRKLTDYRLALYASRTYLDRNPPIEK 179
           + +++V   + +S+  R+A+++I       D LV R++      +Y S T  D + P++ 
Sbjct: 121 IRLDVVISNQSLSLSKRDADVAIRASDRPGDTLVGRRMASIAWGIYGSATQ-DISGPLDP 179

Query: 180 REDLAAHAWIDYVDDLLFSQELKFLSSFCRNPKVVFHSTSVIAQHQAARSGLGIAVLPCF 239
             DL  H WI + D+L   +  K+L       K+++   +V+   +AA +G+G+A+LPCF
Sbjct: 180 -ADLRRHDWIGFSDNLGAIKPAKWLRERVGEEKIIYRVNTVLGLAEAAAAGIGLALLPCF 238

Query: 240 MASGDPELVPLLPGEG-IQRSYWISSRRELHKSVRLRVLWDY 280
           +A+  P LV L+  +  ++   W+ +  ++  + R+R   ++
Sbjct: 239 IAAVTPGLVQLMGRQSELESGLWLLTHPDIKATARVRTFMEH 280