Pairwise Alignments

Query, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 314 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

 Score =  113 bits (283), Expect = 5e-30
 Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 14/291 (4%)

Query: 4   WNDLRYFLELQRSGRLLTAAQRLKTTHATVARHIEAIEKSLGTALFVQHAQGYELTPAGE 63
           W+  R FL + R G L  AA+ L  T  T  RHI A+E+++G  LF++   G   T A  
Sbjct: 9   WDFYRTFLSVLRDGSLSAAARELGITQPTAGRHIGALEEAVGFPLFIRSPHGLMPTEAAL 68

Query: 64  ALLKHAEAMENVALLAEDELTHSAAPLGKI----RLGVAEGLGVMFLASRMGGLFDRYPG 119
           AL  +AE   N+A  A   +  ++  +GKI    R+  ++ +GV  L   +  + + +P 
Sbjct: 69  ALRPYAE---NLAATAAALMRAASGEVGKIEGTVRISASDIIGVEMLPPIVALMQEVHPR 125

Query: 120 LEVELVAVPRFVSILNREAEISIHLERPSVDQLVTRKLTDYRLALYASRTYLDRNPPIEK 179
           LE+EL        +L REA+I+I +  P  D +V R + ++RL  +A+R YL +    + 
Sbjct: 126 LEIELSLSDTLEDLLRREADIAIRMTEPQQDAIVMRYIGNFRLGFHATRDYLAKAGIPKA 185

Query: 180 REDLAAHAWIDYVDDLLF----SQELKFLSSFCRNPKVV---FHSTSVIAQHQAARSGLG 232
            E+L  H  + +     F     Q ++ L     + + +     + S +AQ    R+  G
Sbjct: 186 MEELNEHRMVGFDRKTPFIRAAIQRMRSLDPDIPDIEDISFEIRADSNLAQLAMIRASAG 245

Query: 233 IAVLPCFMASGDPELVPLLPGEGIQRSYWISSRRELHKSVRLRVLWDYVVE 283
           I V    +A  DP LV +LP   I    W++    L  S R R ++  +VE
Sbjct: 246 IGVCQIGLARKDPRLVHVLPDIDIPLHTWVAMHENLKTSPRCRAVFSALVE 296