Pairwise Alignments

Query, 548 a.a., choline dehydrogenase from Pseudomonas simiae WCS417

Subject, 527 a.a., dehydrogenase from Agrobacterium fabrum C58

 Score = 42.4 bits (98), Expect = 4e-08
 Identities = 58/277 (20%), Positives = 111/277 (40%), Gaps = 23/277 (8%)

Query: 9   DYIVVGAGPAGCLLANRLSANPAHRVLLLEAGGRDNYPWIHIPVGYLFCIGNPRTDWCFK 68
           D +++G+G  G  +A +L+A  A ++L++E G +      +     +F     RT   ++
Sbjct: 14  DIVIIGSGVGGSAVALKLAATGA-KILIIERGEKLPNEPENADAEAVFVQNRYRTTDLYR 72

Query: 69  TEAQEGLQGRALSYPRGKVLGGCSSINGMIYMRGQAQDYDGWAAEGNAGWAWK----DVL 124
            E      GR     +   +GG +   G    R + +D+     E     AW     ++ 
Sbjct: 73  DET-----GRTYRPGQYYYVGGHTKFYGTAMFRFRDRDFREVEHEDGVSPAWPVSYAELE 127

Query: 125 PLFKQSENHFAGGSEFHSDGGEWRVEQQRLHWPI-----LDAFRDAAAQSGIAPVN---- 175
           P + ++E  F        D  E       +H PI     +        + G+ P +    
Sbjct: 128 PFYAEAERLFGVRGRAGDDPTEPPRSAPYMHAPIPHEPVIGRVAKGFERLGLRPFHMPSA 187

Query: 176 -DFNQGDN-EGCGYFQVNQ-KAGVRWNAAKAFLKPVRQRPNLTVLTDVDVNRVLLE-NGR 231
            D+  G     CG       +   + +A    L+P  + PN+++LT   V R++ + +G+
Sbjct: 188 IDYGPGGLCRRCGTCDAFVCRFDAKGDAETRLLRPALRHPNVSLLTGARVRRLIADGDGK 247

Query: 232 ASQVIARQHGQQVSWKARKEIVLCAGSVGSPGILQRS 268
               +  +   +++       VL AG++ S  IL RS
Sbjct: 248 HIVAVEIERAGEITTIEAPLFVLSAGAINSALILLRS 284



 Score = 34.3 bits (77), Expect = 1e-05
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%)

Query: 472 HPVGTCRMGSD-KDAVVDAQLRVHGVPGLRIADASVMPRITSGNTCSPTLMIAEKAAQL 529
           H  GT RMG D K+A ++A  + +  P L + DA   P   S    +P L +A +A ++
Sbjct: 446 HQCGTVRMGDDPKEAALNALCQTYDHPNLYVVDAGFFP---SSAALNPALTVAAQALRV 501