Pairwise Alignments

Query, 541 a.a., major facilitator transporter from Pseudomonas simiae WCS417

Subject, 500 a.a., glycine/betaine ABC transporter from Pseudomonas simiae WCS417

 Score =  214 bits (546), Expect = 5e-60
 Identities = 125/344 (36%), Positives = 194/344 (56%), Gaps = 17/344 (4%)

Query: 3   EQAQPLGAAVNTAITRNESKKVIFASSLGTVFEWYDFFLYGALAAVISKQFFAGVNDTTA 62
           +  +P+G    T +   + +K I A++LG   EW+DF +YG +A V+ K FF   + +  
Sbjct: 6   KSVKPIGLKDITIVDDTKVRKAITAAALGNAMEWFDFGVYGFVAYVLGKVFFPDASPSVQ 65

Query: 63  FIFALMAFAAGFVVRPFGALVFGRLGDMIGRKYTFLVTIILMGVATFCVGLLPTYASIGI 122
            I AL  F+  F++RP G L FG LGD  GR+     TI++M ++TF +GL+P+YASIGI
Sbjct: 66  MIAALGTFSVPFLIRPLGGLFFGALGDKYGRQKVLAATIVIMSLSTFAIGLIPSYASIGI 125

Query: 123 AAPIILIVLRMLQGLALGGEYGGAATYVAEHAPAGKRGFHTSWIQSTATLGLLLSLLVVL 182
            API+L++ +M QG ++GGEY GA+ +VAE+AP  KRGF  SW+   +  G +L   VV+
Sbjct: 126 WAPILLLLCKMAQGFSVGGEYTGASIFVAEYAPDRKRGFLGSWLDFGSIAGFVLGAGVVV 185

Query: 183 ACRYFTGD-QFEVWGWRIPFLFSIVLLGISTWIRMSLHESPAF---LKMKEEG------K 232
                 G+  FE WGWR+PF  ++ L  I  ++R +L E+PAF   +   E+G       
Sbjct: 186 LISSILGEADFESWGWRLPFFLALPLGIIGLYLRHALEETPAFQQHMDKMEQGDREGLTH 245

Query: 233 ASKSPIRDSFGK-WENLKIVLIALFSINGGQAVTFYAAQFYVLFFLTQFLKMDPALANML 291
             K   ++   K W +    L+    I     VT+Y    Y+  +L+  L      + +L
Sbjct: 246 GPKVSFKEVATKHWRS----LLTCIGIVAATNVTYYMLLTYMPSYLSHNLHYKEN-SGVL 300

Query: 292 LIISVVIGAPFF-IFFGWLSDKVGRKPVLMLGLLLATALYFPIF 334
           +II++++G  F   F G++SDK+GRKP ++ G +    L  P F
Sbjct: 301 IIIAIMVGMLFVQPFIGFISDKIGRKPFIIAGSIGLLFLSIPAF 344



 Score = 42.4 bits (98), Expect = 4e-08
 Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 4/88 (4%)

Query: 446 VLIVALILIAAMCYGPLAALMVELFPTRIRYTSMSLPYHIGNGWFGGFLPTVSFALVVYT 505
           +LI+A+IL      G +A+ +  +FPT +RY++++  +++ +    G  PT    LV  T
Sbjct: 359 LLILAVIL--NFFIGVMASTLPAMFPTHLRYSALASAFNV-SVLIAGLTPTAVAWLVEST 415

Query: 506 GDIFYGLWYPVVVTGVSLIVGMICLKET 533
            D++   +Y +V   V LI G + +KET
Sbjct: 416 NDLYMPAYYLMVFAVVGLITG-LTMKET 442