Pairwise Alignments

Query, 1021 a.a., ACR family transporter from Pseudomonas simiae WCS417

Subject, 1017 a.a., RND efflux transporter from Pseudomonas putida KT2440

 Score = 1692 bits (4383), Expect = 0.0
 Identities = 841/1015 (82%), Positives = 933/1015 (91%), Gaps = 1/1015 (0%)

Query: 1    MKGSFNLSDWALKHQSFVWYLMFVALLMGVFSYMNLGREEDPSFTIKTMVIQTRWPGATQ 60
            MKGSFNLSDWALKHQSFVWYLMFV+LLMG+FSY NLGREEDPSFTIKTMVIQTRWPGATQ
Sbjct: 1    MKGSFNLSDWALKHQSFVWYLMFVSLLMGIFSYFNLGREEDPSFTIKTMVIQTRWPGATQ 60

Query: 61   EETLKQVTDRIEKKLEELDALDYVKSYTRPGESTVFVFLKDTTSAKAIPEIWYQVRKKID 120
            +ETL QVTDRIEKKLEELD+LDY KSYTRPGESTV+V+L+DTT AK IP+IWYQVRKKI 
Sbjct: 61   DETLYQVTDRIEKKLEELDSLDYTKSYTRPGESTVYVYLRDTTKAKDIPDIWYQVRKKIQ 120

Query: 121  DIRGTFPQGLQGPSFNDEFGDVFGSVYAFTGDGLSMRQLRDYVEQVRAEIRSVPGLGKVE 180
            DIRG FP G+QGP FNDEFGDVFGS+YAFT DGL++RQLRDYVEQ RAE+R VP +GK+E
Sbjct: 121  DIRGEFPAGIQGPGFNDEFGDVFGSIYAFTADGLTLRQLRDYVEQARAEVRDVPNIGKIE 180

Query: 181  MIGQQDEVIYLNFSTRKLAALGIDQRQVVQSLQSQNAVTPAGVIEAGPERISVRTSGQFA 240
            ++G QDEV+YLNFSTRKLAALGIDQRQV+Q+LQ+QNAVTPAG+IEAGPERISVRTSGQFA
Sbjct: 181  LVGTQDEVLYLNFSTRKLAALGIDQRQVMQALQAQNAVTPAGMIEAGPERISVRTSGQFA 240

Query: 241  SEKDLANVNLRLNDRFYRLADIADISRGYVDPARPMFRFNGKPAIGLAIAMQKGGNIQSF 300
            SEKDL  VNLR+NDRF+RLADIADI RGYVDP  PMFR+NG+ AIGLAI M+ GGNIQ F
Sbjct: 241  SEKDLQTVNLRINDRFFRLADIADIERGYVDPPSPMFRYNGQTAIGLAIGMKAGGNIQVF 300

Query: 301  GKALHERMDELTADLPVGVGVHKVSDQAEVVEEAVGGFTSALFEAVIIVLVVSFISLGMR 360
            G AL +RMD++  DLPVGVGVH VSDQA VV++AVGGFTSALFEAV+IVL VSF+SLG+R
Sbjct: 301  GAALKKRMDQVVQDLPVGVGVHTVSDQAVVVKQAVGGFTSALFEAVVIVLAVSFVSLGVR 360

Query: 361  AGLVVACSIPLVLALVFVFMEYSGITMQRVSLGALIIALGLLVDDAMITVEMMITRLEKG 420
            AGLVVACSIPLVLA+VFVFMEYSGITMQR+SLGALIIALGLLVDDAMITVE+M+TRLE G
Sbjct: 361  AGLVVACSIPLVLAMVFVFMEYSGITMQRISLGALIIALGLLVDDAMITVEVMVTRLEMG 420

Query: 421  ETKEQAATYAYTSTAFPMLTGTLVTVAGFVPIGLNASSAGEYTFTLFAVIAVAMLVSWVV 480
            E+KEQAAT+AYTSTAFPMLTGTLVTVAGFVPIGLNASSAGEYTFTLFAVIAVA++VSWVV
Sbjct: 421  ESKEQAATFAYTSTAFPMLTGTLVTVAGFVPIGLNASSAGEYTFTLFAVIAVALIVSWVV 480

Query: 481  AVLFAPVIGVHILSAN-VKPHNAEPGRIGRAFNGGMLWAMRNRWWAIGITVALFVASVFS 539
            AV FAPV+GVHIL  + +K H AEPGR+GRAF GG+LW MRNRW  I  TV LF  ++F 
Sbjct: 481  AVFFAPVLGVHILKGDKLKAHEAEPGRVGRAFEGGLLWCMRNRWLTIIGTVVLFALAIFC 540

Query: 540  MQFVQNQFFPSSDRPELLVDLNLPQNASINETRKAVDRLEAIIKDDPDIARWSTYIGQGA 599
            M+FVQNQFFPSSDRPE+LVDLNLPQNASI ETRK VDR EA IKDDPD+  WSTYIGQGA
Sbjct: 541  MRFVQNQFFPSSDRPEILVDLNLPQNASIEETRKVVDRFEARIKDDPDLVHWSTYIGQGA 600

Query: 600  IRFYLPLDQQLENPYYAQLVIVSKGLEERGELIARLQKRLRDDFVGIGSYVQPLEMGPPV 659
            IRFYLPLDQQL+NPYYAQLVIVSKG EER  ++ RLQK L ++FVG+G+ VQ LEMGPPV
Sbjct: 601  IRFYLPLDQQLQNPYYAQLVIVSKGFEERQAMMDRLQKILHEEFVGVGTNVQSLEMGPPV 660

Query: 660  GRPIQYRVSGKDTDQVRKHAIELATLLDKNSHLGEIIYDWNEPGKVLRIDIAQDKARQLG 719
            GRPIQYRVSG D DQVRKHAIELATLLD+N H+GE+IYDWNEPGKVLR++IAQDKARQLG
Sbjct: 661  GRPIQYRVSGADIDQVRKHAIELATLLDQNEHIGEMIYDWNEPGKVLRVEIAQDKARQLG 720

Query: 720  LSSEDVAQLMNSVVSGASVTQVHDDIYLINVVGRAEDAERGTPETLQNLQIVTPNGTSIP 779
            LSSEDVA +MNS+VSG  +TQV+D+IYL++VV RAED+ERG+P+TLQNLQI+TPNGTSIP
Sbjct: 721  LSSEDVANVMNSIVSGVQITQVNDNIYLVDVVARAEDSERGSPDTLQNLQILTPNGTSIP 780

Query: 780  LLAFATVRYELEQPLVWRRDRNPTITIKASVRDEMQPTDLVKQLKPEIDKFSAGLPVGYK 839
            LL+FATVRYELEQPLVWRRDR PTITIKASV  E+QPTDLV QLKP+ID+F++ LPVG++
Sbjct: 781  LLSFATVRYELEQPLVWRRDRKPTITIKASVNGEIQPTDLVAQLKPKIDEFASKLPVGFE 840

Query: 840  VATGGTVEESGKAQGPIAKVVPLMLFLMATFLMIQLHSVQKMFLVASVAPLGLIGVVLAL 899
            VATGGTVEES KAQGPI KV+PLMLFLMATFLMIQLHSVQK+FLV SVAPLGLIGVVLAL
Sbjct: 841  VATGGTVEESAKAQGPIRKVIPLMLFLMATFLMIQLHSVQKLFLVVSVAPLGLIGVVLAL 900

Query: 900  IPTGTPMGFVAILGILALIGIIIRNSVILVTQIHEYEVAGYTPWDAVVEATEHRRRPILL 959
            +PTGTPMGFVAILGILAL GIIIRNSVILVTQI E+E  G +PWDAVVEAT HRRRPILL
Sbjct: 901  VPTGTPMGFVAILGILALAGIIIRNSVILVTQIDEFEAQGLSPWDAVVEATNHRRRPILL 960

Query: 960  TAAAASLGMIPIAREVFWGPMAYAMIGGIIIATLLTLLFLPALYVAWYKIREPKQ 1014
            TAAAASLGMIPIAREVFWGPMAYAMIGGII+ATLLTLLFLPALYVAWYKIREP++
Sbjct: 961  TAAAASLGMIPIAREVFWGPMAYAMIGGIIVATLLTLLFLPALYVAWYKIREPQK 1015