Pairwise Alignments

Query, 1021 a.a., ACR family transporter from Pseudomonas simiae WCS417

Subject, 1021 a.a., RND efflux transporter from Pseudomonas putida KT2440

 Score =  922 bits (2382), Expect = 0.0
 Identities = 473/1018 (46%), Positives = 670/1018 (65%), Gaps = 11/1018 (1%)

Query: 5    FNLSDWALKHQSFVWYLMFVALLMGVFSYMNLGREEDPSFTIKTMVIQTRWPGATQEETL 64
            FNLS WAL+++  V +LM +   +G  SY  LG+ EDP FT K MVI+T WPGA+ EE  
Sbjct: 3    FNLSAWALRNRQIVLFLMILLAAIGAMSYTKLGQSEDPPFTFKAMVIRTLWPGASAEEVA 62

Query: 65   KQVTDRIEKKLEELDALDYVKSYTRPGESTVFVFLKDTTSAKAIPEIWYQVRKKIDDIRG 124
            +QVT+RIEKKL E    + + S++RPGES V    +D+  +K IPE+WYQ+RKK+ DIR 
Sbjct: 63   RQVTERIEKKLMETGEYERIVSFSRPGESQVTFMARDSLHSKDIPELWYQIRKKVADIRH 122

Query: 125  TFPQGLQGPSFNDEFGDVFGSVYAFTGDGLSMRQLRDYVEQVRAEIRSVPGLGKVEMIGQ 184
            T P  +QGP FNDEFG  FG++YA TG+G     L+DY ++++ +++ V  +GKV++IG 
Sbjct: 123  TLPPEIQGPFFNDEFGTTFGNIYALTGEGFDYAVLKDYADRIQIQLQRVKDVGKVDLIGL 182

Query: 185  QDEVIYLNFSTRKLAALGIDQRQVVQSLQSQNAVTPAGVIEAGPERISVRTSGQFASEKD 244
            QDE +++  S  KLA LG+    V ++LQ QNAV+ AG  E   ER+ +R SG+F S + 
Sbjct: 183  QDEKVWIELSNLKLATLGVPLEAVQKALQEQNAVSTAGFFETPSERLQLRVSGRFDSVEQ 242

Query: 245  LANVNLRLNDRFYRLADIADISRGYVDPARPMFRFNGKPAIGLAIAMQKGGNIQSFGKAL 304
            +    +R+ DR +R+ D+A++ RG+ DP  P  RF G+ AIGLA++M+ GG+I   GKAL
Sbjct: 243  IRQFPIRVGDRTFRIGDVAEVHRGFNDPPAPRMRFMGEDAIGLAVSMKDGGDILVLGKAL 302

Query: 305  HERMDELTADLPVGVGVHKVSDQAEVVEEAVGGFTSALFEAVIIVLVVSFISLGMRAGLV 364
                + L  +LP G+ + KVSDQ   V+  VG F   L EA++IVL+VSF SLG+R GLV
Sbjct: 303  EGEFERLAHNLPAGMALRKVSDQPAAVKAGVGEFVQVLVEALVIVLLVSFFSLGLRTGLV 362

Query: 365  VACSIPLVLALVFVFMEYSGITMQRVSLGALIIALGLLVDDAMITVEMMITRLEKGETKE 424
            VA +IPLVLA+ F  M Y GI + ++SLGAL++ALGLLVDDA+I VEMM  ++E+G  + 
Sbjct: 363  VALAIPLVLAMTFAAMHYFGIGLHKISLGALVLALGLLVDDAIIAVEMMAIKMEQGYDRL 422

Query: 425  QAATYAYTSTAFPMLTGTLVTVAGFVPIGLNASSAGEYTFTLFAVIAVAMLVSWVVAVLF 484
            +AA+YA+TSTAFPMLTGTL+T AGF+PI   ASS GEYT ++F V+ +A+L SWV AV+F
Sbjct: 423  KAASYAWTSTAFPMLTGTLITAAGFLPIATAASSTGEYTRSIFQVVTIALLTSWVAAVVF 482

Query: 485  APVIGVHILSANVKPHNAEPGRIGRA-----------FNGGMLWAMRNRWWAIGITVALF 533
             P +G  +L    K H A  G+ G A               + W +R R   I +T+A F
Sbjct: 483  VPYLGERLLPDLAKLHAARHGKDGHAPDPYATPFYQRVRRLVEWCVRRRKTVILLTIAAF 542

Query: 534  VASVFSMQFVQNQFFPSSDRPELLVDLNLPQNASINETRKAVDRLEAIIKDDPDIARWST 593
            V S+   +FV  QFFP+S RPEL+VDL L + AS+  T + V +LEA++K    I  +  
Sbjct: 543  VGSILLFRFVPQQFFPASGRPELMVDLKLAEGASLANTAERVKQLEALLKQQDGIDNYVA 602

Query: 594  YIGQGAIRFYLPLDQQLENPYYAQLVIVSKGLEERGELIARLQKRLRDDFVGIGSYVQPL 653
            Y+G G+ RFYLPLDQQL    +AQ V+++K +E+R  L + L   +   F  + + V  L
Sbjct: 603  YVGTGSPRFYLPLDQQLPAASFAQFVVLAKSMEDRERLRSWLISTVDQQFPDLRARVTRL 662

Query: 654  EMGPPVGRPIQYRVSGKDTDQVRKHAIELATLLDKNSHLGEIIYDWNEPGKVLRIDIAQD 713
            E GPPVG P+Q+RV+G+  ++ R  A E+A  + +N H+  +  DW EP K + ++I QD
Sbjct: 663  ENGPPVGYPVQFRVTGEHIEKARALAREVADKVRENPHVVNVHLDWEEPSKAVFLEIDQD 722

Query: 714  KARQLGLSSEDVAQLMNSVVSGASVTQVHDDIYLINVVGRAEDAERGTPETLQNLQIVTP 773
            +AR LG+S+  +A  + S + G +V+Q  +D  LI ++ R    ER     L +L + T 
Sbjct: 723  RARALGVSTSHLASFLQSSLIGTTVSQYREDNELIEILLRGTLQERSELANLGSLALPTD 782

Query: 774  NGTSIPLLAFATVRYELEQPLVWRRDRNPTITIKASVRDEMQPTDLVKQLKPEIDKFSAG 833
            NG S+ L   AT+ Y  E+ ++W R+R PT+T++A + D+ QP  LVKQ+ P + +  A 
Sbjct: 783  NGQSVALSQVATLEYGFEEGIIWHRNRLPTVTVRADIYDQEQPATLVKQILPTLQEIRAK 842

Query: 834  LPVGYKVATGGTVEESGKAQGPIAKVVPLMLFLMATFLMIQLHSVQKMFLVASVAPLGLI 893
            LP GY +  GGTVE+S + Q  +   +PL + ++ + LMIQL S  +  +V   APLGLI
Sbjct: 843  LPDGYLLEVGGTVEDSERGQKSVNAGMPLFIVVVLSLLMIQLRSFSRTVMVFLTAPLGLI 902

Query: 894  GVVLALIPTGTPMGFVAILGILALIGIIIRNSVILVTQIHEYEVAGYTPWDAVVEATEHR 953
            GV L L+    P GFVA+LG +AL G+I+RNSVILV QI +   AG   W A++EAT  R
Sbjct: 903  GVTLFLLVFRQPFGFVAMLGTIALAGMIMRNSVILVDQIEQDIAAGMERWQAIIEATVRR 962

Query: 954  RRPILLTAAAASLGMIPIAREVFWGPMAYAMIGGIIIATLLTLLFLPALYVAWYKIRE 1011
             RPI+LTA AA L MIP++R VF+GPMA A++GG+I+AT+LTLLFLPALY AW+++++
Sbjct: 963  FRPIVLTALAAVLAMIPLSRSVFYGPMAVAIMGGLIVATVLTLLFLPALYAAWFRVKK 1020