Pairwise Alignments

Query, 649 a.a., DNA topoisomerase III from Pseudomonas simiae WCS417

Subject, 674 a.a., DNA topoisomerase III from Dickeya dianthicola ME23

 Score =  593 bits (1529), Expect = e-174
 Identities = 304/619 (49%), Positives = 409/619 (66%), Gaps = 3/619 (0%)

Query: 1   MRLYLCEKPSQAKDIAAVLGASRRGDGCWLGNGVTVTWCIGHLLETAPPDAYDEKY-KRW 59
           MRL+LCEKPSQ +DIAAVLGAS+RG G   G    VTW +GHLLE A P+ Y E+Y K W
Sbjct: 1   MRLFLCEKPSQGRDIAAVLGASKRGQGFLSGPDTVVTWAVGHLLENAMPELYGEQYGKPW 60

Query: 60  VLADLPIVPEKWKMRVKPKTASQFKAVKRLLGEAQELVIATDADREGEMIARELVEHCRY 119
            L  LP++P+KW+M VK  TA QF  + RLL ++ E+VIATDADREGE+IAREL+E+CR+
Sbjct: 61  RLDVLPLLPQKWQMVVKKDTADQFAVITRLLKQSDEVVIATDADREGEVIARELLEYCRF 120

Query: 120 RGPIQRLWLSALDDASIRKALAALKPGAETFSLYHSALGRSRADWLIGMNMSRLFTLLGR 179
            G + RLWLSALD+AS+RKALA ++PG ET +LY++ LGR RADWLIGMN+SRL+TL  R
Sbjct: 121 NGVVSRLWLSALDEASVRKALANIRPGNETENLYYAGLGRGRADWLIGMNISRLYTLKAR 180

Query: 180 QSGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVAYWAIDVDLQHERITFTAQWRAAEDA 239
           + GY GVL VGRVQTP L LVV+RDR IA FVP  Y+ ++V L+   + F A+W AA   
Sbjct: 181 ELGYDGVLSVGRVQTPALALVVNRDRLIASFVPKPYFQVNVKLESGGVVFPAEWVAAAAY 240

Query: 240 CDDQGRCLDPQLARDAADAMRNAATARLVKLRTERMREVAPLPFDLGTLQEICSKKLGLG 299
            D + RC++  +A            A ++ +  +R +  APL F LG LQ++C+++ G  
Sbjct: 241 TDGERRCVNQAVAEQVRKLCLTVGKAVILDVEKKREKIPAPLAFSLGVLQQVCAERFGYS 300

Query: 300 AQETLDIAQSLYETHKVITYPRSDCGYLPLSQHSEAPKILAALARADAAVNELMPHIETQ 359
            Q+ LD AQ+LYETHK  TYPR+DCGYLP S  SE P +L+AL ++D ++  ++  I+  
Sbjct: 301 PQQVLDTAQALYETHKATTYPRTDCGYLPESMLSEVPHVLSALQQSDPSLAPVIASIDPS 360

Query: 360 RRSRAWNDAKVSAHHGIIPTGAGKDVGQLTGKHRAVYTLIRARYLAQFLPNHEYDRTQAD 419
            RSR W+D K++AHH IIPT    ++  +    R VYTLIR  YLAQF+P  E D T+A 
Sbjct: 361 FRSRIWDDKKITAHHAIIPTPHKCNLAGMNEAERNVYTLIRTHYLAQFMPLLEMDVTRAS 420

Query: 420 FDCAGQALRAVGKVVIEPGWKRALPEALAPAKGR--EAPAPQALPALVQGQDYAVAKVNL 477
           F+  GQ  R  G+V + PGWK    +A A       +  A  +LP L +     +    L
Sbjct: 421 FNIGGQLFRTSGRVTVVPGWKTLFGQAAASDSDERDDEAAAVSLPPLTKDAVCGIRGAEL 480

Query: 478 KDLWTQPPKPFTEGDLIKAMKNVAKLVEDPLLKQKLKDTTGIGTEATRAGIIQGLLDRGY 537
           K L T+PP+P++   LI AM N A LV+DP LK+ L+D  G+GTEATRAGI+  L+ RG+
Sbjct: 481 KALKTKPPQPYSFKTLIAAMMNAAGLVDDPALKKVLRDNAGLGTEATRAGILDVLMKRGF 540

Query: 538 LVKNGKALSATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMSLEEFVAKQAAWMS 597
           L+K G  L A+  A  L+DA+P A+   G TA+WEQALD + +G+M+L+ FV +Q  W++
Sbjct: 541 LIKKGNHLHASDTACDLVDALPAALTQVGMTALWEQALDDIAAGKMTLDSFVDRQLRWVN 600

Query: 598 KQVARCNGMRMTITGPASP 616
           + V +      TI  P  P
Sbjct: 601 QLVEQGKQQAFTIRVPERP 619