Pairwise Alignments

Query, 356 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 360 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  187 bits (475), Expect = 4e-52
 Identities = 114/338 (33%), Positives = 178/338 (52%), Gaps = 1/338 (0%)

Query: 13  LLVACSKEDAPPEPVRPVLSMEVKAEDQENLGRFAGTIQARYESNLGFRVPGRIARRVVD 72
           LL  C +E A P+    V    V++ D        G IQAR +++L FRV G+I +R+VD
Sbjct: 17  LLSGCGEEKAEPKQHSRVFVQTVQSADFAAAVTLTGDIQARVQTDLSFRVGGKIIQRMVD 76

Query: 73  VGAEVEKGALLAVLDPTDQQNQLRSAQGDLARVQAQYINAQANARRQQELFNRGVGAQAQ 132
           VG  V    +LA LDP D Q  + SAQ  +   QA+     A   RQ++L  +G  ++++
Sbjct: 77  VGDRVTAKQVLAKLDPKDLQTNVDSAQAQVVAEQARVKQTAAAFVRQEKLLPKGYTSRSE 136

Query: 133 LDIAQTDLKTTQATLDQAKASVNQANDQLRYAELRTDHAGIVTAWNAEAGQVVSAGQQVV 192
            D AQ  L+++Q+ L  A+A +  A +QL Y  L  D  G++TA  AE GQVV A   + 
Sbjct: 137 YDSAQAALRSSQSALAAAQAQLANAREQLGYTSLIADAPGVITARQAEVGQVVQATVPIF 196

Query: 193 TLARPDIKEAVIDLPAGLAERLPPDVVFLVAGQLDPSVNTTAIVREIEPQAQSATRTRRA 252
           +LAR   ++AV ++   L    PPD    V+   +PS+     VRE+ P   + T T + 
Sbjct: 197 SLARDGERDAVFNVYESLLVEPPPDAPITVSLLDNPSIKAVGKVREVTPAVAANTGTVQV 256

Query: 253 RLTLTETPPAFRLGTAISVTLSTAIAPRIEVPLSALQEVDGKTRIWLLDTHSQTVQTRDI 312
           ++ L   P    LG+ +S T +      IE+P +AL +   +  +WL+D   +  Q   +
Sbjct: 257 KIALQALPKGMELGSVVSATANGPAKASIELPWAALTKDLSEPAVWLIDGDGK-AQLHKV 315

Query: 313 SVISRDADSALLNDGVKPGERIVIAGVNSLKPGQKVKI 350
           +V        ++ DG+K GE++V+AG   L PG +V+I
Sbjct: 316 TVARYLTGKVIIGDGLKGGEKVVVAGGQLLHPGMRVEI 353