Pairwise Alignments

Query, 356 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 362 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score =  182 bits (462), Expect = 1e-50
 Identities = 114/344 (33%), Positives = 181/344 (52%), Gaps = 3/344 (0%)

Query: 13  LLVACSKEDAPPEPVRPVLSMEVKAEDQENLGRFAGTIQARYESNLGFRVPGRIARRVVD 72
           +L  CSKE+ P E +  V   +V+  D        G +QAR +++L FRV G+I  R VD
Sbjct: 17  MLTGCSKEEVP-ETLPRVGVQQVQPTDFAARVTLTGDVQARVQTDLSFRVGGKIISRSVD 75

Query: 73  VGAEVEKGALLAVLDPTDQQNQLRSAQGDLARVQAQYINAQANARRQQELFNRGVGAQAQ 132
           VG  V+   +LA LDP D QN + SA+ ++   QA+     A   RQQ+L  +G  +Q++
Sbjct: 76  VGDHVKANQVLARLDPKDLQNNVDSAKAEVFAAQARVTQTSAAFVRQQKLLPKGYTSQSE 135

Query: 133 LDIAQTDLKTTQATLDQAKASVNQANDQLRYAELRTDHAGIVTAWNAEAGQVVSAGQQVV 192
            D A+  L++ Q+ L  A+A +  AN+QL Y  L ++ AG++T   AE GQVV A   + 
Sbjct: 136 YDAAEAALRSNQSALKAAQAQLANANEQLSYTALVSEAAGVITERQAEVGQVVQATMPIF 195

Query: 193 TLARPDIKEAVIDLPAGLAERLPPDVVFLVAGQLDPSVNTTAIVREIEPQAQSATRTRRA 252
           +LA    ++AV ++   L    P D   +V+   DP V     VREI P   + + T + 
Sbjct: 196 SLAVDGDRDAVFNVYESLLVAPPSDAGVVVSLLDDPKVQAHGFVREITPTVSAQSGTVQV 255

Query: 253 RLTLTETPPAFRLGTAISVTLSTAIAPRIEVPLSALQEVDGKTRIWLLDTHSQTVQTRDI 312
           ++ L + PP  +LG  ++ T +    P IE+P SAL +   +  +W++      V+ R +
Sbjct: 256 KVGLKDVPPGMQLGAPVTATTNAQGRPSIELPWSALTKALHEPAVWVVG-EGDKVELRKV 314

Query: 313 SVISRDADSALLNDGVKPGERIVIAGVNSLKPGQKV-KIDEDSP 355
            +        ++  G+K GE +V+ G   L PG +V K+D   P
Sbjct: 315 EIRRYLTGKIVVASGLKGGETVVVNGGQLLHPGMQVLKVDAKGP 358