Pairwise Alignments

Query, 364 a.a., tRNA 2-selenouridine synthase from Pseudomonas simiae WCS417

Subject, 349 a.a., Selenophosphate-dependent tRNA 2-selenouridine synthase from Variovorax sp. SCN45

 Score =  120 bits (302), Expect = 4e-32
 Identities = 102/333 (30%), Positives = 153/333 (45%), Gaps = 44/333 (13%)

Query: 18  MMDTRAPVEFVKGAFPGAVNLPLMTDDERQRVGTCYKQQGQQAAIVLGHELVSGAIKAQR 77
           ++D R+P EF     PGA+N P++ D+ER+ VGT Y Q G   A  +G  +V+  I A+ 
Sbjct: 18  LIDARSPAEFALDHIPGAINCPVLDDEERRIVGTVYVQTGAFEARRIGGAMVAANI-ARH 76

Query: 78  IEQWAQFAQANPEGYLYCFRGGLRSQIVQQWLKTEAGIEYPRVGGGYKAMRSFLLETVEQ 137
           +         N +  +YC+RGG+RS  +  WL+   G +  ++ GGYK+ R  ++  ++ 
Sbjct: 77  LRDTLADRPENWKPLVYCWRGGMRSGSMVTWLRL-VGWDAQQLAGGYKSFRRHVISQIDA 135

Query: 138 AATQCDFVLLGGMTGTGKTEVLGQL----RNALDLEGHANHRGSSFGK-RATGQPSNIDF 192
              + D  ++ G TG+ KT VL  L       LDLE  A+H+GS  G      QPS   F
Sbjct: 136 LTPKLDLRVICGATGSAKTRVLHALAARGAQVLDLEDFASHKGSLLGSLPGVPQPSQKHF 195

Query: 193 ENRLA-----VDLLKKRAGGIEGFVVEDESRMIGSCALPLPLHKGMQTYPMVWLEDSVEG 247
           E  +A     VDL +          VE ES  IG  +LPL L   M+    + +  + E 
Sbjct: 196 ETLIAAVLEGVDLSRP-------LYVEGESIRIGRLSLPLSLVARMRAAQCIEVCATPEA 248

Query: 248 RVERILRDYVVDLCAEFVDVFGEQGHALFAERLTQSLANIHKRLGGERFQRLQAVMQDAL 307
           R+  +LRDY            G+   A     L   L  + +  G E   R Q    +A 
Sbjct: 249 RLAYLLRDYA---------YLGDDRDA-----LADKLGALKELQGKETVARWQQWAHEA- 293

Query: 308 AEQARSGAVDLHRVWIEGLLREYYDPMYAFQRE 340
                    DL  ++ E L+  +YDP Y   +E
Sbjct: 294 ---------DLPHLFAE-LMALHYDPHYQKSQE 316